Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g2671 | ATGAGTGACTCAAAGAATGAAGCCACTGCAAACAATGGCCAATATGGCTCTTCAGATCAGATGAAACGTGAGACTGAGCTGGAATTATCCCCAGAAGAGGAAGATATCGTTGCAAAAATGTTTAGATTGGTTGGAAAAAGATGGCATCTCATTGCTGGGAGAATCCCTGGAAGAACTGCAGAAGATATTGAAAAGTATTGGACTTCAAAATTCTCTTCATCATCAACTGCATGTTAA | 237 | 0.3966 | MSDSKNEATANNGQYGSSDQMKRETELELSPEEEDIVAKMFRLVGKRWHLIAGRIPGRTAEDIEKYWTSKFSSSSTAC* | 79 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g2671 | 78 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 30 | 75 | IPR017930 | - | |
Tpr7g2671 | 78 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Tpr7g2671 | 78 | SMART | sant | 25 | 73 | IPR001005 | - | |
Tpr7g2671 | 78 | Pfam | Myb-like DNA-binding domain | 30 | 68 | IPR001005 | - | |
Tpr7g2671 | 78 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Tpr7g2671 | 78 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 1 | 75 | - | - | |
Tpr7g2671 | 78 | PANTHER | MYB TRANSCRIPTION FACTOR | 1 | 75 | - | - | |
Tpr7g2671 | 78 | SUPERFAMILY | Homeodomain-like | 30 | 71 | IPR009057 | - | |
Tpr7g2671 | 78 | Gene3D | - | 29 | 77 | - | - | |
Tpr7g2671 | 78 | ProSiteProfiles | Myb-like domain profile. | 30 | 71 | IPR001005 | - | |
Tpr7g2671 | 78 | CDD | SANT | 30 | 67 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g2671 | Tpr-Chr7 | 33933704 | 33934882 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g2671 | 29 | 77 | MYB Transcription Factor Family | AT5G52600 | 40.816 | 8.64e-13 | 58.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Tpr7g2671 | Myb_DNA-binding | 1.1e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g2671 | - | - | mtr:MTR_2g023100 | 131.724 |