Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2665 ATGGATCAAAAGAATCAAGAGCAGCCAAGGGAACAAGAGAATCATGCTCCAACAGGAACACAAGTAAATGGAGAAAACCAAAATCATTCAAACCAGATAATGCAACTACCTCACCCTCTGATTCACAGTGCAGGGGCTTCTACATTTTCATCTTATCTGAGCAGAGATCCATTCCAACATTTTCCTCACAAATATTTTAACCAACAAAACTTGCAGACGAAACTCGCCACTTTCTGGGCGATACAAAACGATGAAATTCGCGAGACCATGGACTTCAAAACTCATCGGATTCCTTTATTACGGATAAAAAAGATAATGAAAGCTGATGAGCAAGTCAATAAGATATCGGCTGACGCGCCTATTCTGTTTGCTAAGGCATGTGAGATGTTTATTATGGAGCTAACAATAAGGTCTTGGGCTAATGCAGATTTTAACAGAAGAAGAACACTTCATAAGGGTGACATTGCATCTGCAATATCAAATACTGATGTATTTGATTTCTTAGTTGATATTGTTCCAAAGGAAGACACAATGGAACATGACATATTTAAGGATATACCAAGAAGTGAGTGTGTTCCATTAAGGAATGTTAATGTTCCTTATTATGTGCCAGTTTCTCTGCAACCTCAGTATGTTCCCATGCAACCTCAGTATGCTGCAGGTCCATCCTATTCCTATGGTCCTCAAGGAATGCTTATGGGAGGACATGTTCTCAATCAACCTTATTACAACATGCAGCAGCTACCTCAACCTTTTGCAAATCAAAGGTTTGCAATTCAAAAACAGGAAAATGATGAGTCTAATGATTTGCGTGGTTCAGAGAATTAA 828 0.3877 MDQKNQEQPREQENHAPTGTQVNGENQNHSNQIMQLPHPLIHSAGASTFSSYLSRDPFQHFPHKYFNQQNLQTKLATFWAIQNDEIRETMDFKTHRIPLLRIKKIMKADEQVNKISADAPILFAKACEMFIMELTIRSWANADFNRRRTLHKGDIASAISNTDVFDFLVDIVPKEDTMEHDIFKDIPRSECVPLRNVNVPYYVPVSLQPQYVPMQPQYAAGPSYSYGPQGMLMGGHVLNQPYYNMQQLPQPFANQRFAIQKQENDESNDLRGSEN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2665 275 MobiDBLite consensus disorder prediction 12 27 - -
Tpr7g2665 275 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED 24 203 - -
Tpr7g2665 275 SUPERFAMILY Histone-fold 71 168 IPR009072 GO:0046982
Tpr7g2665 275 Gene3D Histone, subunit A 60 174 IPR009072 GO:0046982
Tpr7g2665 275 MobiDBLite consensus disorder prediction 1 27 - -
Tpr7g2665 275 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 96 159 IPR003958 -
Tpr7g2665 275 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 24 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2665 Tpr-Chr7 33878922 33879749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2665 78 209 CCAAT-HAP5 Transcription Factor Family AT5G63470 58.647 1.79e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Tpr7g2665 CBFD_NFYB_HMF 4.7e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2665 K08066 - qsu:112026379 188.348