Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2646 ATGGATTGGATTAGAGGAAGAATCATCGGCCGGGGCTCGACCGCAAATGTCTACATGGCTGAGCACCGTGGTGATTTTGGCGAGGTTTGTGCGGTGAAGTCTGCTGAGCTTCACCGCGCAGAGTTTTTGAAGAAAGAACAAGAGATTCTCTCTAAGTTGAAATGTTCACAAATTGTGAATTATCAAGGATGTGAAGTTACGGTTGAGGATGGTGTTCAATTGTTCAATATGTTCATGGAGTATGCAACTAAGGGGACTGTTTCCGATGCCGTTCGCGGTGGAAATGGAATGGAAGAAGCTATGGTGAGGTTATATGTGCGACAAATTCTACTTGGACTTAACTATCTTCATTCAAATGGGATAGTGCATTGTGATTTGAAGGGACAAAATGTGTTGTTGACGGAACAAGGAGCGAAAATTGCGGATTTTGGTTGTGCTAGGAGGGTGGAAGAGGAGTTGGTGATCTCCGGTACACCGGTTTTTATGGCGCCGGAGGTGGCACGTGGCGAGGAACAGGGGTTTTCTGCTGATGTATGGGCTTTGGGATGTACTATGTTGGAGATGATCACCGGGAAAATGCCGTGGGGTGGAGTTTCTGATCCGGCGGCTGTTTTATATCGAATTGGATTCTCCGGTGATATGCCGGAGATTCCTGACTCTGTTTCGGAACAGGGGAAGGATTTTTTGAGGAAATGTTTGAAGAGAGATCCAAATGAGAGATTGTCTGTGATTGAGCTTCTGGAACATGATTTTGTTGCTGAGAAGTTTAAGGATTCGGTGTTTGATTCCGAAACTCCGACAACCGTGTTGGAAGGTGGATTTTGGGATTGGGATTCTTTGGAAACAACTCAGGAGGTGGGTCCCACAGCTGATCATTGTTCCTCGGATTCTTCGAGTTCGAGTTCGAGTCCAAGAGACAGAATTCAAAGATTGTGTTCAAATGAGGCTATTTGGGAATTTGATGATGATGAAGAATGGGTTACTGTGAGAAACAATGGTGAGGATTTGAATGCATTGTCATTTGAAGAAAATGAATCAGACAATGAATCAGACATTGTTTGTGAACATGATGATGATGAGATTAGTTTGGTAATTTTTTATGAACCAAAAATTGTAGTTGAATTGAGTACAAGGGATTCCATTTTTGATTATTGGTGTTTTAGTAGCTGCAATTGTAGCTGTTTTGTTAGAGATTTTTTATCAGTTTATCAATGCAGAAAGATTGTTCTCTATGTAAAAATTTATTCTCAGAATAAAGAAAATTTTATCATGTCCTGCTTTCTACATTTTGTTTTATCTTTAATTTTCCATCAGATAGATAATTTGAACAATATAATCGTCGTAAACATAGTTCAATTAGTAGAAACATTGCATGTAATATGCAAAACTGAAGCTTGA 1398 0.4034 MDWIRGRIIGRGSTANVYMAEHRGDFGEVCAVKSAELHRAEFLKKEQEILSKLKCSQIVNYQGCEVTVEDGVQLFNMFMEYATKGTVSDAVRGGNGMEEAMVRLYVRQILLGLNYLHSNGIVHCDLKGQNVLLTEQGAKIADFGCARRVEEELVISGTPVFMAPEVARGEEQGFSADVWALGCTMLEMITGKMPWGGVSDPAAVLYRIGFSGDMPEIPDSVSEQGKDFLRKCLKRDPNERLSVIELLEHDFVAEKFKDSVFDSETPTTVLEGGFWDWDSLETTQEVGPTADHCSSDSSSSSSSPRDRIQRLCSNEAIWEFDDDEEWVTVRNNGEDLNALSFEENESDNESDIVCEHDDDEISLVIFYEPKIVVELSTRDSIFDYWCFSSCNCSCFVRDFLSVYQCRKIVLYVKIYSQNKENFIMSCFLHFVLSLIFHQIDNLNNIIVVNIVQLVETLHVICKTEA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2646 465 MobiDBLite consensus disorder prediction 286 307 - -
Tpr7g2646 465 Pfam Protein kinase domain 6 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2646 465 SUPERFAMILY Protein kinase-like (PK-like) 2 290 IPR011009 -
Tpr7g2646 465 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2646 465 ProSitePatterns Protein kinases ATP-binding region signature. 9 33 IPR017441 GO:0005524
Tpr7g2646 465 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 351 - -
Tpr7g2646 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tpr7g2646 465 ProSiteProfiles Protein kinase domain profile. 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2646 465 Gene3D Transferase(Phosphotransferase) domain 1 2 296 - -
Tpr7g2646 465 CDD STKc_MAPKKK 2 252 - -
Tpr7g2646 465 PANTHER MAP KINASE KINASE KINASE 1 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2646 Tpr-Chr7 33686324 33687805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2646 2 425 MAP Kinase Kinase Kinase AT5G55090 42.117 2.68e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr7g2646 Pkinase 3.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2646 K20716 - gmx:100802174 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2646 7 33686324 33687805 Tpr7g2646 7 33686324 33687805 ECH