Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g2641 | ATGGACAAAGGTTGGGGACTTGCTCTTGATACTTCTTCATCTTCCTCACCAATACCAATTTCATCTTTGAATTCATTCTCTAGACATAACACCAACGATAATAATAATAATAATAATAGAATGTTTCCTATTTTAGGATTCCCTGTTAACCTTACCCGTAACACCGAAGACGGCGGTGACCGGAAAATAACCAGTGAAGTCGATTTCTTCTCCGATAGAAACAAACCATCATCTTCAGCTTCTCATGAGCAGCATCAACATGTTAAATCCAACATCGTCAAAAAAGAGATTATATCAACCGATGAAAAACACGTTAATACTGGTTTGCAACTTGCAAACACCGGGAGTGATCAATCTGTTGTTGATGATGGAGTTTCATCCGATGCTGAAAATAAACGTGCCAAGACTACTGAGCTCGCACAGTTGCAAGTGGAGCTTCAAAGAATGAATTCAGAAAACAAAAAGCTGAAAGAAATGCTCAACCATGTTACCGGTAATTACACGGCTTTGCAGATGCAACTTGTCGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGCTGTTAATGCAAAAGCTGAGGAGAAAAATCAAGGTGTTGGTGGAGGAATGGTACCGAGACAATTTCTCGCGATAACTAATGGAACAACAGAAGTTGATGATCAAGTATCAAATTCTTCATCTGATGAAAGAACAAGATCAAACACACCTATGAATAATCAAATTGAAGGTGGAACAAGAGATCATATAAGAAATAACAATGGTAAAAATGGTAGAGATGATAGTCCAGAATCAGAAACACAAGGTTGGGGTCCTAATAAGGCTCAGAAAATATTGAACTCTTCCAATGTTAATGATCAAGCTAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCCGTTCGTGCTAGATCGGAAGCTTCAATGATTAGTGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAAGGAAATCCATGTCCTCGCGCATATTATAGATGCACTATGGCTGTTGGTTGTCCGGTTCGCAAACAAGTTCAACGTTGTGCCGAGGACAAAACAATTTTAGTAACAACATATGAAGGAACACACAATCATCCATTACCACCAGCAGCAATGGCAATGGCATCAACAACATCAGCAGCAGCAAGTATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTTCCTTGTTCAACAAGTATGGCAACACTTTCAGCTTCAGCACCATTTCCAACTGTTACATTAGATCTTACACAAAACTCAAATCCAAATCCATTACAATTTCAAAGACCTCATCATGCACCATTTCAAGTACCTAATTTTTTTCAAGGACAACAACAGCCTCAGAATTTTGCACAAGCAGCTGCATCACTTTATAATCAATCTAAATTCTCTGGTCTTCAATTGTCTCAAGAAATTGGTTCGTCTCATTTAACCACACAAGCTTCAACACAACAGCAACAACAACAGCCTTCTTTGGCCGACTCGGTCAGCGCCGCAACAGCTGCGATCACTTCGGATCCTAATTTCACGGCTGTTCTCGCCGCCGCTATCTCCTCTATTATTGGTGGTGGTCATGCAAACAATAACAATGCCAACACCAACAATAATAGCAGAAGTTCTATTAGCAACTTTTCAGGAAACTAA | 1692 | 0.3924 | MDKGWGLALDTSSSSSPIPISSLNSFSRHNTNDNNNNNNRMFPILGFPVNLTRNTEDGGDRKITSEVDFFSDRNKPSSSASHEQHQHVKSNIVKKEIISTDEKHVNTGLQLANTGSDQSVVDDGVSSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLNHVTGNYTALQMQLVALMQKNHHTENEAVNAKAEEKNQGVGGGMVPRQFLAITNGTTEVDDQVSNSSSDERTRSNTPMNNQIEGGTRDHIRNNNGKNGRDDSPESETQGWGPNKAQKILNSSNVNDQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPLQFQRPHHAPFQVPNFFQGQQQPQNFAQAAASLYNQSKFSGLQLSQEIGSSHLTTQASTQQQQQQPSLADSVSAATAAITSDPNFTAVLAAAISSIIGGGHANNNNANTNNNSRSSISNFSGN* | 564 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g2641 | 563 | Coils | Coil | 132 | 166 | - | - | |
Tpr7g2641 | 563 | SUPERFAMILY | WRKY DNA-binding domain | 303 | 371 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr7g2641 | 563 | PANTHER | WRKY TRANSCRIPTION FACTOR 6 | 46 | 550 | - | - | |
Tpr7g2641 | 563 | Coils | Coil | 174 | 194 | - | - | |
Tpr7g2641 | 563 | MobiDBLite | consensus disorder prediction | 264 | 294 | - | - | |
Tpr7g2641 | 563 | Pfam | WRKY DNA -binding domain | 312 | 369 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr7g2641 | 563 | ProSiteProfiles | WRKY domain profile. | 305 | 371 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr7g2641 | 563 | MobiDBLite | consensus disorder prediction | 213 | 248 | - | - | |
Tpr7g2641 | 563 | Gene3D | WRKY domain | 295 | 372 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr7g2641 | 563 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 46 | 550 | IPR044810 | GO:0003700 | |
Tpr7g2641 | 563 | MobiDBLite | consensus disorder prediction | 213 | 294 | - | - | |
Tpr7g2641 | 563 | SMART | WRKY_cls | 310 | 370 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr7g2641 | 563 | MobiDBLite | consensus disorder prediction | 249 | 263 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g2641 | Tpr-Chr7 | 33612339 | 33615385 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g2641 | 1 | 546 | WRKY Transcription Factor Family | AT1G62300 | 49.833 | 1.85e-152 | 447 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tpr7g2641 | WRKY | 5.9e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g2641 | - | - | gmx:100802124 | 664.455 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tpr7g2641 | 7 | 33612339 | 33615385 | Tpr7g2641 | 7 | 33612339 | 33615385 | ECH | |
Tpr7g2641 | 7 | 33612339 | 33615385 | Tpr2g3138 | 2 | 35374387 | 35377231 | ECH | |
Tpr7g4128 | 7 | 50373702 | 50377851 | Tpr7g2641 | 7 | 33612339 | 33615385 | ECH | |
Tpr4g1433 | 4 | 13960067 | 13963221 | Tpr7g2641 | 7 | 33612339 | 33615385 | ECH |