Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2635 ATGGCTTTGGCCATTACACTATCATCAGCTACATCTTCTAAAATGGAAGAACCAACCTCTTCTCATCAAGGAACAAGCAACTTCTTCCTTTCACGAAAACAAAACAGAGTATCTCTCACATGTGACAAATATCCCAAAGTTTGTCTTATCAATGGTAGCGCCGGCCCTGATTGTTGCAACAACAAATGTGTCAATTTTACCAGAGACATGTTTAATTGTGGGAAGTGTGGAAAGAAATGTAGTTTTCCAAAGATATGTTGTGAAGGTAAATGTGTGAATCCAAGGAGTAACAAGAAACATTGTGGGAAATGTGGTAACAAGTGTGAGAGTAGAGGTTCTTGTGTTGATTCAAAATCTATCTCTGACCAACGAAAATACCACCAAATACATACATCGATTCAACAAAAATTCACGGTAAAGGTGAAAGAGATTAATTCAGACAAAGCTACATGGAATTTTAAGGCAAAAGTTATCAGGCTTTGGGAATTTAATTTAGTTCCTATTTCTGATGTTGTCAGCGGAGGTTATGACACTGATTTTTTAGTGGATGTTATTGGTGTTTTGACTGGTGTGGGTTCTGAGCGTGAGATAACCAATCAAAATGGAAGCAGCACAAAGCTTAATGTTGTGGCCTTGGAGGCAGATGGGCATAAACTACAGTGCACTTTGTTTGGACCTTATGTTGATGAACTTAATAATTTTCTTGCTTCTGGGGATCACACCAATGCTGTTATGATTGTACAACTTGCAAAGGCAAAGACTTTTCAAGACAAGATTCATATACAAAATTGCATGAATTGCACCCGGCTGTTCTTTAACCCAAATTGTCAGGAAAGTATAATCTTGAAGGAAAGCTTGCCTGAAAGTCTAGAGAGTCCTTCTCCGATGACGCTTACCCAAATCACTGCTGAGCCGGGAGTTAGCCCACTCGATGAGTTCCTATTCAACTCACCAAGAATCACTTTGCAAGCCATGAAAGATGCTACAAATGAATCCGTGAATGTTGTCTGTGCAACTGTCAAAAGGATCTTGAACCCTGAATGCTTCTGGTACACTGCTTGTGTTTGTAACAAATCTGTTATTCCAGATTCAAACATGTTTTTTTGCGACAAATGCAATAAGCATGTGTTGAAGGTGATACCTAGGTATTGCATGAAGGTTAGGGTTATTGATCAGACGGATTCTGCCACATTTGTGATATTTGACAAAGATGCAAGCTCTTTGTTCCAAATGAGCTGTGCTGATATGTTAGATGACATCCAAAGGGTTGCTGGTGTTGGAGGGGTGCCATCTCAATTAACTAGCCTGATTGATAAGACTTGGTTGTTTAAAGTGGAGACTAAACCTTCAAATAATCCCAGATTTGAACAGACATTTAAAGTCAGAAAGATCTGCACCGATGCTAACATAATCAAGCAATTTAAAGACAAGTGGGATCATGAGGAAGCTTCAATTAGCAAGCTAAACAATGAGGTTGGTTCCTTGAGTACTTTGATTGGCAAAGGGAAGGATGTATTAGTTTGTGGTTCTACTAATATCTTATCTGAGGATTCACTGTCATTGAATGAAAGTAACTCCAAGGACCAAGGAAAGTCAATTATTTGTGATAATACTCCTATTGCATGTACCCAAGATTTAATGTGTAAATTTTCTTCTACTGTTGTGGACCTTGACGATCCTTCTCTTGACTCTTTTATTTGCAACAAAGATGGTGGTGATATAAAGAAAAGTGATATGTCTTCAAAGCTTTCAATTGCTGCAAGTAGTCTAGAGGGAGGAGGAAAGGACATAGTTGTTGAGGCGGTTGATCTTCAAAAATCCGTTGGAACAACGACCAAAGAAGAAGCTGTTGGAAAAACTTATAGTGGAGTTGTTCATAAAGATGAATTTGTGGCCAACAAAAACATCAAGGAAGAGAAAACATTGGCTGGATGTGGAGAAATGGCAAAAGGCATGGTCATTGAGGGTAGTTCTGTTGGAAAAATTCAACAAATTAAGGGAATGACAAGATCTGATGTTGTCAATCTTGATGAAGATATTCATGAGTCTGGTTCTAGCATGGTAATAGCTCTTAATCAAATTGGTTCAACTGACATTAAAGCAATCAAGGGAAAAAAAATAAGCAAGAGAATTTCTCCTGAAAAGCAAGATGAAGATGACAATGCACCTATCAAGCTTTTGAAAAGAGCAATCAAAATTGAAAAGATTACTTAG 2214 0.3803 MALAITLSSATSSKMEEPTSSHQGTSNFFLSRKQNRVSLTCDKYPKVCLINGSAGPDCCNNKCVNFTRDMFNCGKCGKKCSFPKICCEGKCVNPRSNKKHCGKCGNKCESRGSCVDSKSISDQRKYHQIHTSIQQKFTVKVKEINSDKATWNFKAKVIRLWEFNLVPISDVVSGGYDTDFLVDVIGVLTGVGSEREITNQNGSSTKLNVVALEADGHKLQCTLFGPYVDELNNFLASGDHTNAVMIVQLAKAKTFQDKIHIQNCMNCTRLFFNPNCQESIILKESLPESLESPSPMTLTQITAEPGVSPLDEFLFNSPRITLQAMKDATNESVNVVCATVKRILNPECFWYTACVCNKSVIPDSNMFFCDKCNKHVLKVIPRYCMKVRVIDQTDSATFVIFDKDASSLFQMSCADMLDDIQRVAGVGGVPSQLTSLIDKTWLFKVETKPSNNPRFEQTFKVRKICTDANIIKQFKDKWDHEEASISKLNNEVGSLSTLIGKGKDVLVCGSTNILSEDSLSLNESNSKDQGKSIICDNTPIACTQDLMCKFSSTVVDLDDPSLDSFICNKDGGDIKKSDMSSKLSIAASSLEGGGKDIVVEAVDLQKSVGTTTKEEAVGKTYSGVVHKDEFVANKNIKEEKTLAGCGEMAKGMVIEGSSVGKIQQIKGMTRSDVVNLDEDIHESGSSMVIALNQIGSTDIKAIKGKKISKRISPEKQDEDDNAPIKLLKRAIKIEKIT* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2635 737 Gene3D - 315 475 IPR012340 -
Tpr7g2635 737 Gene3D - 158 292 IPR012340 -
Tpr7g2635 737 Pfam Replication factor-A C terminal domain 338 448 IPR013955 -
Tpr7g2635 737 CDD RPA1_DBD_B_like 183 278 - -
Tpr7g2635 737 Pfam Stigma-specific protein, Stig1 13 115 IPR006969 -
Tpr7g2635 737 PANTHER REPLICATION FACTOR A 1, RFA1 118 417 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Tpr7g2635 737 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 118 417 - -
Tpr7g2635 737 CDD RPA1_DBD_C 336 464 IPR013955 -
Tpr7g2635 737 MobiDBLite consensus disorder prediction 6 25 - -
Tpr7g2635 737 SUPERFAMILY Nucleic acid-binding proteins 163 289 IPR012340 -
Tpr7g2635 737 SUPERFAMILY Nucleic acid-binding proteins 330 470 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2635 Tpr-Chr7 33557023 33563267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2635 162 413 Core DNA Replication Machinery Family AT2G06510 25.660 3.37e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2635 - - mtr:MTR_4g036240 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2635 7 33557023 33563267 Tpr7g2635 7 33557023 33563267 ECH