Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2627 ATGGTTTTAGCTATTAAAACATTACGATTTTACAGGAGCTACTACAAATGCAGCACTTTCAAAGATTGTCCAGCAAGAAAACTAATTGAAAAAAGCAAAACCGAAGAGGACACTTATGTTATAACATATCGAGGAAAGCACGATCACCGAATACCAGAAGTTAAACGAAACTCTGATATTGGGACCTCTCGGAACAAGTCATCAGAGACTCGATTATCCGTTGTCGAACCAGTTGGATCATCTCAAAATTTCAAAAACTTGAGTTCTCCTAATGTGGGGATGGTGCAGTTTGATCAGTCGGAGAGTAACAACGGTCAAGTTCTTGACGGTCATTTAAAAATCACTAATCTAGAAACTGAACTTAATGAGAGTCAATCACATGTTGTCGGAGAAGTTGGATCATCCCAAGATGTTCAGAGATTAGATTCACATAACAAGATGATGTTAGAGTGTGATGAGCTGGAGAGAAACAAAGCTCAGATTTTCCAAGGTGAATTAGAAATCCCTTATTCTGAAATAGAATTTACTGGAAGCTATAATGACGATGATGACATTTTGATACCAAATATGTCAGCTATGTTAGAAGATTTCCTACTGGAATATAATCACCTTGATGGTTCTGTATTACCTTAA 633 0.3681 MVLAIKTLRFYRSYYKCSTFKDCPARKLIEKSKTEEDTYVITYRGKHDHRIPEVKRNSDIGTSRNKSSETRLSVVEPVGSSQNFKNLSSPNVGMVQFDQSESNNGQVLDGHLKITNLETELNESQSHVVGEVGSSQDVQRLDSHNKMMLECDELERNKAQIFQGELEIPYSEIEFTGSYNDDDDILIPNMSAMLEDFLLEYNHLDGSVLP* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2627 210 Gene3D WRKY domain 4 53 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g2627 210 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 204 IPR044810 GO:0003700
Tpr7g2627 210 MobiDBLite consensus disorder prediction 50 72 - -
Tpr7g2627 210 SMART WRKY_cls 4 51 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g2627 210 Pfam WRKY DNA -binding domain 5 49 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g2627 210 ProSiteProfiles WRKY domain profile. 12 52 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g2627 210 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 12 204 - -
Tpr7g2627 210 SUPERFAMILY WRKY DNA-binding domain 5 52 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2627 Tpr-Chr7 33521664 33522296 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2627 5 76 WRKY Transcription Factor Family AT4G23550 37.500 1.79e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr7g2627 WRKY 8.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2627 - K13425 mtr:MTR_2g024380 202.216