Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2626 ATGATCACAACATATCAAATTTTCTTAGTTTTCTTAATTTTCCTTCTGTCTGTTATGAGAACAGAGGGAAGCTGTTCTTCAACCTGCCTTGGTCTAGCATCCTATTACATACCAGAAGGATCAAACTTAACTTACATTAACTACCTTTTCAACCAACAATCCTCAGAAATTCAAAAATACAGTCCAAATCTTAAAAACATCGATGTTATTCTAACTAATACAAGAATAAACGTGCCATTCACGTGTGAGTGTCTCAACGGTGTGTTCTTAGGACACACTTTCTCGTACACAATAATACATGGTGACACATACACCTCAATTGCTAACGTTATATATTCGAATCTTACAACTGAGGATTGGGTGACTAGGGTCAATAGCTATCCACCTACAGATATTCCTGTTAATGCTAAAATCAATGTTACTGTTAATTGCTCTTGTGGTGTTAGACAAGTGTCAAGAAAATATGGGTTGTTTTTGACATACCCACTTCGGAAAGGTGAAAATTTGAGTGGTATTGCGGCGGAGAATGGTGTTCCGGTGGATGTTTTGCAGAAGTATAACCCTGGTTCCAATTTTAGTGATGGACATGGTCTTGTTTTTGTGCCGGCTAGAGATGAAAATGGAAAATTTCCACCACTGCACCTCAGATCAGGAATGTCCAAAGGAGGCATTGCTGGCATAGTTGTTGGAGGAGCTTTTGTGATCTTACTTTTGGCAATCATTCTATATATTATGTTATATAGAAGAAGAAAAGTGGCTGAAGTAACCCTTCTGCCAGTCCCTGGAGCATCTGAAGATCAATATAGTCAACTCCAACATGGTTGTGGAAGCAGCATAGATAAAGCATCAGAATCTACTACTATTGCTTCTCCAAGGTTGACAGGTATTACAGTTGACAAGTCAGTTGAGTTCTCATATGAGGAGTTAGCTAAAGCTACCGATGGCTTTAGCGAAGCTAAAATAATCGGTCGGGGTGGATTTGGATCTGTATACTATGCCGAGCTTCGAAACGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAAAGAATTCTTAGCTGAACTAAAGGTTCTCACACATGTCCATCACTTAAACTTGGTGCGGCTAATTGGATATTGTGTTGAAGGCTCTTTATTTTTGGTTTATGAGTACATTGAGAATGGAAATTTAAGTCAACATTTGCGCGGCACAGAGAAGGATCCATTATCATGGCCTGCTAGAGTTCAAATTGCCTTAGACTCAGCAAGAGGATTGGAATACATTCATGAGCATACAGTTCCTGTCTACATTCATCGAGATGTTAAATCAGCAAACATTTTGATCGACAAAAACTTCCGTGGAAAGGTTGCAGATTTTGGTTTGACAAAATTGACCGAATACGGTAGCTCCTCGTTACAAACGCGCCTTGTTGGGACATTTGGTTATATGCCTCCCGAATATGCACAATATGGCGAAGTTTCTCCCAAAATAGATGTTTATGCATTTGGAGTTGTTCTGTTTGAGCTTATATCTGGCAAACATGCTATTGTGAAGACCAATGAGCCAGAGAGTGAATCAAAAGGACTAGTTGCACTGTTTGAAGAAGTTCTTGTTCTGCCAGACCCAAAAGAAGATCTTGGTAAATTTGTTGACACTAGGCTTGGTGAAAATTACCCTATTGACTCAGTATTTAAGATGTGTCAACTTGCCAAAGCATGCACACATGAAAATGCTCAACTTAGGCCAAGCATGAGATCAATTGTAGTTGCTTTAATGACACTTTCATCAGCAGCTGAGGATTGGGATGTTGGCTCTTTCTATGAAAACCAAGCATTAGTGCATTTAATGTCTGGAAGGTAG 1845 0.3919 MITTYQIFLVFLIFLLSVMRTEGSCSSTCLGLASYYIPEGSNLTYINYLFNQQSSEIQKYSPNLKNIDVILTNTRINVPFTCECLNGVFLGHTFSYTIIHGDTYTSIANVIYSNLTTEDWVTRVNSYPPTDIPVNAKINVTVNCSCGVRQVSRKYGLFLTYPLRKGENLSGIAAENGVPVDVLQKYNPGSNFSDGHGLVFVPARDENGKFPPLHLRSGMSKGGIAGIVVGGAFVILLLAIILYIMLYRRRKVAEVTLLPVPGASEDQYSQLQHGCGSSIDKASESTTIASPRLTGITVDKSVEFSYEELAKATDGFSEAKIIGRGGFGSVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGTEKDPLSWPARVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLFELISGKHAIVKTNEPESESKGLVALFEEVLVLPDPKEDLGKFVDTRLGENYPIDSVFKMCQLAKACTHENAQLRPSMRSIVVALMTLSSAAEDWDVGSFYENQALVHLMSGR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2626 614 Pfam LysM domain 164 194 IPR018392 -
Tpr7g2626 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Tpr7g2626 614 ProSiteProfiles Protein kinase domain profile. 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2626 614 Pfam Protein tyrosine and serine/threonine kinase 319 585 IPR001245 GO:0004672|GO:0006468
Tpr7g2626 614 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 6 614 - -
Tpr7g2626 614 SMART serkin_6 316 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2626 614 SUPERFAMILY Protein kinase-like (PK-like) 294 586 IPR011009 -
Tpr7g2626 614 CDD LysM 160 191 IPR018392 -
Tpr7g2626 614 Gene3D Transferase(Phosphotransferase) domain 1 387 598 - -
Tpr7g2626 614 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Tpr7g2626 614 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 614 IPR044812 GO:0019199|GO:0045087
Tpr7g2626 614 Gene3D Phosphorylase Kinase; domain 1 297 386 - -
Tpr7g2626 614 CDD STKc_IRAK 322 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2626 Tpr-Chr7 33514612 33520023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2626 7 614 Receptor kinase-like Gene Family AT3G21630 55.911 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr7g2626 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2626 - K13429 gmx:100802308 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2626 7 33514612 33520023 Tpr7g2626 7 33514612 33520023 ECH