Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2623 ATGGCACATACCCTTTTTCTTTTTCTTACCTCATTCTCTTTCATCTTTTCTTCATTTCCTCATTTTTCTCTTGCCAACACTGACCCTTCTGATGTTCAAGCTCTTGAGGTTATGTACAATGCATTGAATAATCCAACTGAATTAAAGGGTTGGAAAATTGGTGGTGGTGATCCATGTGGAGATTCATGGAAAGGGATTACTTGTGAAGGTTCAGCTGTTGTTTCTATTGATCTCTCTGGTTTAGGACTCCATGGAACTCTTGGATACTTGCTTTCAGACCTTATGTCACTTAGAAAGCTTGATTTAAGTGGCAACAAGATCCATGATACAATTCCCTATCAGTTACCACCAAATCTTACAAGCTTAAATCTTGCGGGAAATAACTTAACCGGAAATCTTCCGTATTCGATTGCTCTCATGGTTTCACTCGATTATCTGAATGTGAGCAATAATGCACTCTCTATGTTAATCAGTGACGTTTTTGCTAATCATTCCCGTCTTGATACCCTGGATCTATCATTTAATAACTTTTCTGGGGATCTTCCACCTTCGTTTGGTTCACTGTCAAGTCTCTCTTCTCTTTTCTTGCAGAAGAATCAGCTGACTGGTTCTCTTAATGTTCTTGATGGTTTGCCATTGGATAATTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCTCATGAGCTTAAATCTATCGATAATTTCATATATGATGGAAATTCTTTCAATGATGGCCCTGCACCTCCTTCGCCAGAGTCTACTTTGTCTCCACCTAGTGATTCTCATAAACGTAATCATCACTCCGGGTCTGGTTCACATAATAAAACACAGGGTTCTAATGATCAAAACTCCGATGACGATAAGGGAACGTCAGCGGGGGCCATTGTTGGGATTGTTTTAGGTTCAGTATTGGTGTTTTCTGTTGTTCTAGTTGCTCTTCTTTTCTGTATCCGAAAACTAAAAGGGAAGGAAAAGGGCGCAAGAACTTCTAACGGGAGCCTTCCTCCCGGAATAATCAATGTAACTCCTCAGATGCAAGAGCAAAGGGTGAAAAGTGCTGCTGTTATTACAGATCTCAAACCTCGTCCGCCTGCAGAAAATGTGACAATGGATAGGATGGCTATAAAAAGTGGATCAGTAAAGCAGATGAGGTCTCCTATCACTTCCACATCGTATACAGTTGCTACGCTCCAGAGTGCAACAAATAGCTTCAGTCAAGAATTTATTATTGGTGAAGGTTCTCTTGGCCGAGTTTATAGAGCTGAATTCCCAAATGGGAAGGTAATGGCTGTTAAGAAGATTGACAATGCAGCACTTTCATTACAAGAGGAAGACAATTTTCTGGAAGCTATTTCGAATATGTCACGCTTGCGGCATCCGAACGTTGTTACACTGGCTGGATATTGTGCAGAACATGGCCAACGACTTCTAATTTATGAATATATTGGAAATGGAAATCTTCACGATATGCTCCATTTTACTGAAGATAGCAGTAAAGCTTTACCTTGGAATGCACGTGTACGCATAGCTCTTGGCACAGCCCGAGCCTTAGAGTACTTGCACGAAGTTTGCTTGCCATCTGTTGTACATAGAAATTTCAAATCAGCAAATATATTACTCGACGAGGAGCTCAATCCTCACCTGTCTGACTGTGGCTTAGCATCCCTTACACCAAACACCGAGCGACAGGTATCATCAACTCAAATGGTCGGTTCATTTGGTTATAGTGCTCCCGAGTTTGCACTATCAGGAGTATACACCGTAAAAAGCGATGTTTACAGCTTTGGAGTGGTTATGCTGGAACTTTTAACTGGTCGTAAGCCACTTGACAGTTCGAGAGCTAGAGCTGAGCAATCACTTGTAAGGTGGGCTACACCGCAGCTCCATGATATAGATGCCTTGTCCAAAATGGTTGATCCTTGTTTGAATGGCATGTATCCTGCAAAATCGTTGTCACGCTTCGCTGATATCATTGCCCTCTGCGTTCAGCCGGAACCGGAATTTCGACCTCCAATGTCCGAGGTGGTGCAAGCATTGGTACGGTTAGTACAAAGAGCAAGCGTGGTTAAAAGGAGACCAAGTGATGAATCTGGTTTTGTTCACAAGACACCAGACCATGAGTCCATAGACATGTCATTTTAA 2148 0.4171 MAHTLFLFLTSFSFIFSSFPHFSLANTDPSDVQALEVMYNALNNPTELKGWKIGGGDPCGDSWKGITCEGSAVVSIDLSGLGLHGTLGYLLSDLMSLRKLDLSGNKIHDTIPYQLPPNLTSLNLAGNNLTGNLPYSIALMVSLDYLNVSNNALSMLISDVFANHSRLDTLDLSFNNFSGDLPPSFGSLSSLSSLFLQKNQLTGSLNVLDGLPLDNLNVANNNFSGWIPHELKSIDNFIYDGNSFNDGPAPPSPESTLSPPSDSHKRNHHSGSGSHNKTQGSNDQNSDDDKGTSAGAIVGIVLGSVLVFSVVLVALLFCIRKLKGKEKGARTSNGSLPPGIINVTPQMQEQRVKSAAVITDLKPRPPAENVTMDRMAIKSGSVKQMRSPITSTSYTVATLQSATNSFSQEFIIGEGSLGRVYRAEFPNGKVMAVKKIDNAALSLQEEDNFLEAISNMSRLRHPNVVTLAGYCAEHGQRLLIYEYIGNGNLHDMLHFTEDSSKALPWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLASLTPNTERQVSSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRARAEQSLVRWATPQLHDIDALSKMVDPCLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFVHKTPDHESIDMSF* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2623 715 Gene3D Phosphorylase Kinase; domain 1 368 483 - -
Tpr7g2623 715 MobiDBLite consensus disorder prediction 248 290 - -
Tpr7g2623 715 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 25 711 - -
Tpr7g2623 715 SUPERFAMILY Protein kinase-like (PK-like) 383 681 IPR011009 -
Tpr7g2623 715 MobiDBLite consensus disorder prediction 273 290 - -
Tpr7g2623 715 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tpr7g2623 715 MobiDBLite consensus disorder prediction 696 715 - -
Tpr7g2623 715 PANTHER OS01G0253100 PROTEIN 25 711 IPR045271 GO:0004714|GO:0006468
Tpr7g2623 715 ProSiteProfiles Protein kinase domain profile. 406 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2623 715 SUPERFAMILY L domain-like 28 233 - -
Tpr7g2623 715 ProSiteProfiles Leucine-rich repeat profile. 96 117 IPR001611 GO:0005515
Tpr7g2623 715 Gene3D Ribonuclease Inhibitor 28 286 IPR032675 -
Tpr7g2623 715 SMART LRR_typ_2 140 163 IPR003591 -
Tpr7g2623 715 SMART LRR_typ_2 94 122 IPR003591 -
Tpr7g2623 715 SMART LRR_typ_2 188 210 IPR003591 -
Tpr7g2623 715 Gene3D Transferase(Phosphotransferase) domain 1 484 706 - -
Tpr7g2623 715 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672|GO:0006468
Tpr7g2623 715 CDD STKc_IRAK 412 684 - -
Tpr7g2623 715 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2623 Tpr-Chr7 33480439 33485917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2623 140 715 Strubbelig Receptor Gene Family AT4G22130 70.364 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tpr7g2623 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2623 - - gmx:100781455 1100.12