Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2615 ATGAGTCAACTCGGTTTATTATTACAGGAACCGGTCACTACCACGACTCAAACAACCGAGTCAAGAACGATTCTCGGTTTGTTAAGAGAAGAACAAATGGACGGTCTTGATGATTTGCCTCGTAGAAGAAGACGTAGCTTCAAGGAACGGTTAGGATTTATCGGTTTTGGTTGTTGTGGAACCACATGGGGATTCCGTTCTTCTTCTTCTTCTTCATCTCAGAATATTCAGCAACAAATTCCGGACATGGATATGGATACGGATCCGGGTCAGGATCCGAATAGGTGTGTGGGTTTAACGGCTCCGACGAGTTCGGGTTCAAGTTCGAGTATGAATCTTGCGGCGGCGTTGGCGGCGGAGAGACAACTCCGAGGAGTAGGACAAGCGGCGGAAACGAACGTTGTTGGAGTAGGGAGGATGCCGGGGACGCCATGGAGAGTGTCGTTGATGCGGTTGTTGGAGGAAACGGAAAATGGAGACACGGCGGCGGTAGTGTCTAAGGTGGCGGAGGAGAAAGTTTGTAGTGTGGCGGGGAATGATTCAGTGTGTTGCGTGTGCATGGGGAGGAATAAAGGTGCGGCGTTTATTCCATGTGGACATACTTTTTGCAGGGTATGTTCTAGGGAGCTGTGGCTTAATAGAGGGTCTTGTCCTCTTTGTAATCGTTCAATTCTTGAGATTCTTGATATTTTTTAG 696 0.4828 MSQLGLLLQEPVTTTTQTTESRTILGLLREEQMDGLDDLPRRRRRSFKERLGFIGFGCCGTTWGFRSSSSSSSQNIQQQIPDMDMDTDPGQDPNRCVGLTAPTSSGSSSSMNLAAALAAERQLRGVGQAAETNVVGVGRMPGTPWRVSLMRLLEETENGDTAAVVSKVAEEKVCSVAGNDSVCCVCMGRNKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2615 231 PANTHER OS01G0917900 PROTEIN 21 231 - -
Tpr7g2615 231 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 21 231 - -
Tpr7g2615 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 230 IPR013083 -
Tpr7g2615 231 Pfam Zinc finger, C3HC4 type (RING finger) 180 225 - -
Tpr7g2615 231 ProSiteProfiles Zinc finger RING-type profile. 183 221 IPR001841 -
Tpr7g2615 231 SUPERFAMILY RING/U-box 177 228 - -
Tpr7g2615 231 SMART ring_2 183 220 IPR001841 -
Tpr7g2615 231 CDD RING-HC 183 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2615 Tpr-Chr7 33368515 33369742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2615 24 231 C3H Transcription Factor Family AT4G22250 50.704 2.29e-60 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3123 2 35270430 35271382 Tpr7g2615 7 33368515 33369742 PCT