Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2595 ATGAAAGTAACTCCTACCCCTTCGGATACTGAGGTTTCTGCACTTGAAAACAAAAATCTGGGACGTATCACGCAAATAATTGGGCCGGTACTCGATGTAGATTTTCCACCAGGAAAGATGCCTTATATTTACAACGCTCTGATAGTTCAAGGTCGAGATAGTGTTGGCCAACAAATTAATGTAACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAATTAGAGCTGTAGCTCTGAGTGCTACGGATGGTCTAAAGAGAGGACTGGAAGTGGTTGACACGGGAGCTGCTCTAAGTGTTCCAGTTGGCGGAGCAACCCTAGGTCGAATTTTCAACGTGCTTGGAGAGCCTATTGATAATTTGGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCTGCGCCTTCCTTTGTACAGTTAGATACAAAATTATCCATTTTTGAAACTGGAATTAAAGTAGTCGATCTTTTAGCCCCCTATCGTCGCGGCGGAAAAATAGGACTTTTAGGGGGGGCTGGGGTAGGTAAAACCGTACTCATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCTGTATTTGGCGGAGTAGGTGAGCGTACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCCGGAGTAATTAATGAAAAAAAGATTGATGAATCAAAAGTAGCTCTAGTCTATGGTCAAATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCCGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCCGTTTTGTCCAAGCCGGATCCGAAGTATCGGCCTTATTGGGCCGAATGCCTTCCGCTGTGGGTTATCAACCTACCCTAGGTACTGAAATGGGTACTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGATCCTGCTCCTGCCACGACATTTGCACATTTGGATGCAACTACTGTACTCTCAAGAGGATTAGCTGCCAAAGGTATTTATCCAGCAGTAGATCCTTTAGATTCAACGTCAACCATGCTCCAACCTCGGATCGTTGGGGAAGAACATTATCAAACTGCGCAAAGAGTTAAACAAACGTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATTCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAATCGTAGCAAGAGCACGAAAAATTGAACGTTTCTTTTCACAACCTTTTTTCGTAGCAGAAGTATTTACCGGTTCCGGAGGGAAATATGTCGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTCGACAGTCTTCCTGAACAAGCCTTTTATTTAGTAGGTAATATCGATGAAGCTACTGCGAAGGATGCGAACTTACGAAATTAG 1479 0.4192 MKVTPTPSDTEVSALENKNLGRITQIIGPVLDVDFPPGKMPYIYNALIVQGRDSVGQQINVTCEVQQLLGNNRIRAVALSATDGLKRGLEVVDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPSFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLLGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKKIDESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEEDRLIVARARKIERFFSQPFFVAEVFTGSGGKYVGLAETIRGFKLILSGEFDSLPEQAFYLVGNIDEATAKDANLRN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2595 492 Hamap ATP synthase subunit beta [atpB]. 18 490 IPR005722 GO:0015986|GO:0045261|GO:0046933
Tpr7g2595 492 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 95 IPR004100 GO:0046034|GO:1902600
Tpr7g2595 492 PANTHER ATP SYNTHASE 1 490 - -
Tpr7g2595 492 Gene3D - 375 492 IPR024034 -
Tpr7g2595 492 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 375 489 - -
Tpr7g2595 492 Gene3D - 98 374 IPR027417 -
Tpr7g2595 492 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 19 96 IPR036121 GO:0046034|GO:1902600
Tpr7g2595 492 Gene3D - 12 97 - -
Tpr7g2595 492 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 152 372 IPR000194 GO:0005524
Tpr7g2595 492 CDD F1-ATPase_beta 98 377 - -
Tpr7g2595 492 ProSitePatterns ATP synthase alpha and beta subunits signature. 363 372 IPR020003 GO:0005524
Tpr7g2595 492 SMART AAA_5 164 356 IPR003593 -
Tpr7g2595 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 377 IPR027417 -
Tpr7g2595 492 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 490 - -
Tpr7g2595 492 TIGRFAM atpD: ATP synthase F1, beta subunit 20 489 IPR005722 GO:0015986|GO:0045261|GO:0046933
Tpr7g2595 492 CDD ATP-synt_F1_beta_C 379 486 - -
Tpr7g2595 492 CDD ATP-synt_F1_beta_N 19 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2595 Tpr-Chr7 33183037 33186280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2595 23 431 Primary Pumps ATPases(2) AT1G20260 26.667 5.16e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2595 K02112 - gmx:3989272 877.856