Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2560 ATGGGAACTTCTCAAGGACAGCCAAATTCAGCTTGTATTAATTCATCATCTAATGGTAGTAGCAGTCAAGGAACTAATGTTTCTTATGAAACAAGCAACATGGAGAAGCAATTCTCTACCTTGGAATCATCTCAAGCATCCGTTGATTTCACAGCTTTTCATTTTGACAATAACATGAATGGATCGCCGATAAGTGATGACTATAGAGCAGATAATAACAGCTTTGAATTGAAGAAAAAACTTAAAGACTTGGAGGTTTCATTGTTAGGCCCCGAGTCGGATATCGTCGATAGCTGTCAGTCTTTCTCAAATGGTAGCCGGCACAAAGGCGTGTCTCAACATAATTGGTCTAAGATTGTAGAAATGATTCCAAAACTAGACTTGAAAGAAGTTCTTATTACATGTGCACAAGCTGTTTCTGATGGTGATATTGAATCAGCATCAGGATACATGAACAATGTGTTAGGAAAAATGGTATCGGTCAGCGGTGATCCGATTCAGAGGTTAAGTGCTTACATGTTGGAAGGTTTAAGAGCAAGGTTGGAATCATCAGGGAGTGTAATTTATAAAGCACTGAAATGTGACGAACCGACAAGTAACGAATTAATGAATTATATGCAAATATTGTATCATGCTTGCCCATATTTTAAGTTTGCTTACATATCTTCCAATGTTTTCATTTGTGAAGCATTGGAAAATGAGTCAAGAATTCACATAATTGACTTCCAAATTGCACAAGGGACACAATGGTTGTCACTTTTGCAGGCTCTTACGCGTAGACCAGGTGGACCTCCGTTTGTTCGTGTGACAGGTATCGATGATTCACGATCGTTTCATGCTAGAGGTGGAGGAATTCATATTGTAGGAAAAAAGCTAGCAGATTATGCTAAAACTTGTGGAGTTCCATTTGAGTTTCATAGTGTTGCAATGTTTGGAAGTGATGTTCAATTGGAAGATCTTGTAGTTCGAAATGGTGAAGCTCTTGCTGTGAATTTTCCTTTTGCTTTGCATCATATGCCGGATGAGAGCGTGAGCACAGAGAATCATAGAGACCGGCTTTTGAGATTGGTGAGTAGTTTGTCACCTAAGGTTGTGTTACTTGTGGAGCAAGAATCCAACACAAACACTTCTCCATTTTTTCAAAGGTTTGTTGAGACTTTGGATTATTATACTGCTATGTTTGAATCAATTGATGTGGCTCTTCCTAGAGATGATAAGAAGAGGATCAGTACAGAACAACACTGCGTGGCTCGCGATATTGTTAACATTATAGCTTGTGAGGGAGATGAGAGGGTTGAAAGACATGAACTTTTTGGAAAGTGGAGGGCAAGATTTTCAATGGCGGGTTTTGTACCGTTACCATTGAGTCCCTCGGTAATTGATTCAATTAGAAATCTCTTGAAACATTTCAATGAAAATTATAGAATTGAAGAGACAGATGTTGCTATCTATTTAGCATGGAAAAGTAGATTTATGTGCACATTTTCTGCTTGGAGATGTTCTTGA 1506 0.3845 MGTSQGQPNSACINSSSNGSSSQGTNVSYETSNMEKQFSTLESSQASVDFTAFHFDNNMNGSPISDDYRADNNSFELKKKLKDLEVSLLGPESDIVDSCQSFSNGSRHKGVSQHNWSKIVEMIPKLDLKEVLITCAQAVSDGDIESASGYMNNVLGKMVSVSGDPIQRLSAYMLEGLRARLESSGSVIYKALKCDEPTSNELMNYMQILYHACPYFKFAYISSNVFICEALENESRIHIIDFQIAQGTQWLSLLQALTRRPGGPPFVRVTGIDDSRSFHARGGGIHIVGKKLADYAKTCGVPFEFHSVAMFGSDVQLEDLVVRNGEALAVNFPFALHHMPDESVSTENHRDRLLRLVSSLSPKVVLLVEQESNTNTSPFFQRFVETLDYYTAMFESIDVALPRDDKKRISTEQHCVARDIVNIIACEGDERVERHELFGKWRARFSMAGFVPLPLSPSVIDSIRNLLKHFNENYRIEETDVAIYLAWKSRFMCTFSAWRCS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2560 501 ProSiteProfiles GRAS family profile. 119 499 IPR005202 -
Tpr7g2560 501 Pfam GRAS domain family 128 499 IPR005202 -
Tpr7g2560 501 MobiDBLite consensus disorder prediction 1 28 - -
Tpr7g2560 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 73 498 IPR005202 -
Tpr7g2560 501 PANTHER SCARECROW-LIKE PROTEIN 13 73 498 IPR030005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2560 Tpr-Chr7 32841647 32845394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2560 54 499 GRAS Transcription Factor Family AT4G17230 58.744 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr7g2560 GRAS 3.2e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2560 - - gmx:100817987 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3093 2 35054710 35057539 Tpr7g2560 7 32841647 32845394 PCT