Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2549 ATGACTTCATTAGCTACGAAAAACCTATGGATTAGGAAGCAACAATGTCCTTGTGGAGATTGGAAATGTTACATTACATATGAGGGTGATTCTGAGGAGGGTTCGGTAGCACCGGAATCGGTGAAAGAAGAAAAAATATCATCTTGTAGAGCTATGATTATTACCCCTTATGTTGGAATGGTGTTTAAGAGTGATGATGAAGCTTTTGAACATTATGGTAATTTTGCTAGGAAAAATGGTTTTTCTATTAGGAAAGAAAGGTCTAGAATTAGTCCTCAGTTAGGCGTTTATAAGCGTGATTTTGTTTGTTACCGATCAGGGTTTGCACCGGTGAAGAGGAAAGCTAATGGTGAACATCAGAGAGATAGGAAATCGGTTAGGTGTGGATGTGATGCTAAAATGTATCTGTCTAAGGAGGTTGTTGATGGTGTTTCTCAATGGTTTGTTGTTCAGTTTAGTAATATACATAATCACGAACTTTTGGAAGATGATCAAGTTCGCCTTTTACCTGCGTATAGGAAAATACACGAGGCTGATCAAGAGCGTATACTGTTGCTTTCGAAAGCTGGATTTCCGATACATCGGATAGTGAAAATGCTTGAGGTTGAAAAGGGGATTCAAGGCGGACATTTGCCTTTCTTGGAAAGGGATGTGAGGAACTTTGTCCAAAACCGTAAGAAGATTGTTCAAGAGAATGAGGCATTGCTAAGTGAGAAAAGAGAAAATGATGTTTTGGAACTTCTTGAGGTGTGCAAAGCAATGAAAGAAGCTGATGTTGAGTTTGTTTATGATTTTACCGTCGATGAGAATGAGAAGGTTGAAAATATAGCTTGGTCATATGGTGATTCTGTTAATGCGAATGCCATGTTTGGTGATGTAATTTATTTTGACACTTCTCATCGATCGATCACTTATGGATTGCTTTTTGGAGTGTGGTTTGGTATTGATAATTGTGGCAGAACCATTTTTTTCGGTTGTGTTTTATTGCAGGATGAAACACCACAATCCTTCGCATGGGCGTTACAGGCATTTCTCCGGTTCATGAGAGGAAGATGTCCACAAACAATTCTATCTGATCTTGATCCTGGTCTTAGAGACGCCGTTAGAAGCGAATTTCCAGGAACTAAACATGTCATTCTAGTGTGGAATATTATAAACAAGGTACCAAGTTGGTTTTCTCTTCCTCTTGGGTCTCGTTATGCCGAGTTTAAATCCGAGTTTAATGCCTTATTTAACATTGAGAATACAGAAGAATTTGAACTTCAGTGGAGCCAAATGATTTCTGTTTTTGGACTTGATTCAGATAAACATATTGATTTACTGTATTCTGTTCGAGCCTCCTGGGCACAACCCTATGTAAGAGGTTATTTTTTGGCTCGAATGGCGACAACAACTTATTCCAAGTCTATAGATGCATTTTTGAAAGGAATCTTCACTCAACATACATGTTTGCGTAGCTTTTTTGAACAGGTTGGCATTTCTGCAAATTTCCAACGTCAGTCACATCAGGAGACTCAATTTACAAATCTTAGAACTTGCATACCAATTGAAGAGCATGCACGGAGCATTCTCACACCTTATGCTTTCAATGCTTTGCAACAAGAATTATCATTGGCAATGCAATACGCTACATCTGAAATGGCCAATGGATCATATATTATACGACACTTCAAAAGGTTGGATGGAGAATGGCTCGTGTTCTGGCTACCAGAAGATGAACAGATACACTGCTCTTGCAAGGAATTTGAATCGTCGGGAATATTATGCAGACATGCTCTTCATGTACTTGTTATAAAGAATTACTTTCAGCTTCCTGACAAATACTATTTAAGTAGATGGCGCCGGGAATGTTCTTTACTTGTTGAGGATGAGAATAACAACCAAAGTATTATTGGTGGGGAATGGTTTCAAGAATATCAATCTTTAGCTGAAACTTTGTTTTCAGAATCATCAATTACAAAGTATCGATCTGACTTTGTTCGCAAAGAACTGACAAAAGAACTTAATAGGATTCTTAATGAGGTTAGAAATCTGCCTGAGACTGATGAAGTCTGTAACATGAATGTGACGGTTTCGCCAAATAGCTAG 2088 0.3827 MTSLATKNLWIRKQQCPCGDWKCYITYEGDSEEGSVAPESVKEEKISSCRAMIITPYVGMVFKSDDEAFEHYGNFARKNGFSIRKERSRISPQLGVYKRDFVCYRSGFAPVKRKANGEHQRDRKSVRCGCDAKMYLSKEVVDGVSQWFVVQFSNIHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLEVEKGIQGGHLPFLERDVRNFVQNRKKIVQENEALLSEKRENDVLELLEVCKAMKEADVEFVYDFTVDENEKVENIAWSYGDSVNANAMFGDVIYFDTSHRSITYGLLFGVWFGIDNCGRTIFFGCVLLQDETPQSFAWALQAFLRFMRGRCPQTILSDLDPGLRDAVRSEFPGTKHVILVWNIINKVPSWFSLPLGSRYAEFKSEFNALFNIENTEEFELQWSQMISVFGLDSDKHIDLLYSVRASWAQPYVRGYFLARMATTTYSKSIDAFLKGIFTQHTCLRSFFEQVGISANFQRQSHQETQFTNLRTCIPIEEHARSILTPYAFNALQQELSLAMQYATSEMANGSYIIRHFKRLDGEWLVFWLPEDEQIHCSCKEFESSGILCRHALHVLVIKNYFQLPDKYYLSRWRRECSLLVEDENNNQSIIGGEWFQEYQSLAETLFSESSITKYRSDFVRKELTKELNRILNEVRNLPETDEVCNMNVTVSPNS* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2549 695 ProSiteProfiles Zinc finger SWIM-type profile. 567 600 IPR007527 GO:0008270
Tpr7g2549 695 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 683 IPR031052 GO:0006355
Tpr7g2549 695 Pfam SWIM zinc finger 566 595 IPR007527 GO:0008270
Tpr7g2549 695 Pfam FAR1 DNA-binding domain 71 161 IPR004330 -
Tpr7g2549 695 Pfam MULE transposase domain 293 386 IPR018289 -
Tpr7g2549 695 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 683 - -
Tpr7g2549 695 SMART 26again6 575 602 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2549 Tpr-Chr7 32725660 32729285 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g2549 MULE 2e-13 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2549 - - gmx:100817107 1220.68