Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2534 ATGGACCTCTTCGCCGCCGAACACGTCGCTCCATTTCCCGACTCCGGTGACCTTCTCTTCGCCGCCGGCCTCCTCTCCACTCACCACAATCCCCAAAAACTCCGCCCTATCAGGTCCGTCCCTCCTCCTCCTGGTTACCTCGTTCACTCTCAGTCCCCTCCCAACCCTCACCCTCTAGAACCTTCCAACAAGTCTCAAGACCCGACCGAATCCGGGTCGGGTCATTCTCAGTTGCCTCCTGGCCTCGAACCCGGTTCGTCTTTGGATGATGATGATGACGACGATGCGGAAAATTCATCTGCAAGTACTAAAGAATTTGGCTCCAGAAAGAAAAGGAAAAAGACGGCGAGAAAGCTTGAAGATTTTGTATCAAATTTGGTGAAGACGGTGATGGAAAAGCAAGAGCAGATGCATAACGAATTGATGGAAATGATAGATAAGAAGGAAAAGGAAAGAATACAAAGAGAAGAAGCTTGGAGGCGCGAGGAGATGGAAAGAATTAAGAAGGACGAAGAAGCTAGAGCGGCAGAAAGGGCTCGTAGCTTAGCCCTCATATCGTACATTCAGAAACTATTAGGTCAAGAAATTCAGATTCCTCAACCAGAAGAAGAAAGCCAGAAACTATTAAGTCGTGCAATTCAGATCTATCAGCCAGCTGAAGGAAGCGGAAAAAGAGAAGAGGGTGACGTTGCGCTGAGCAACAACAAAAGAGATTTCAACGGCGATCCGAGTAACAATAGATGGCCAGTTGTGGTGAACAACAACAAAAGAGATTTCAACGGCGAACCGTGTAACAATAGATGGCCAGATGCGGAAGTACAAGCGCTCATAGCAGTAAGAACTGCATTGGAATACAAGTTCAGTCATATGGGATCGAAAGGATCATCAATATGGGAGGAGATATCTGATGCAATGCGAGACAGGGGATACAATCGTTCTGCGAAGAAGTGTAAGGAGAAATGGGAAAACATCAACAAGTACTATAAGAGGACAGTGGGAAGTGGCAGGAAACGGCCTCTAAATAGTAAAACTTGTTCTTACTTCAATGAATTGGACAATCTGTATAGAAATGGATACTCCAACAGCCTTGGAGATGCATTAACCATTACCAACAACGTTTCCATTTCTGAAGAAAAGGAGCAGGGTGAAATTTGA 1155 0.4589 MDLFAAEHVAPFPDSGDLLFAAGLLSTHHNPQKLRPIRSVPPPPGYLVHSQSPPNPHPLEPSNKSQDPTESGSGHSQLPPGLEPGSSLDDDDDDDAENSSASTKEFGSRKKRKKTARKLEDFVSNLVKTVMEKQEQMHNELMEMIDKKEKERIQREEAWRREEMERIKKDEEARAAERARSLALISYIQKLLGQEIQIPQPEEESQKLLSRAIQIYQPAEGSGKREEGDVALSNNKRDFNGDPSNNRWPVVVNNNKRDFNGEPCNNRWPDAEVQALIAVRTALEYKFSHMGSKGSSIWEEISDAMRDRGYNRSAKKCKEKWENINKYYKRTVGSGRKRPLNSKTCSYFNELDNLYRNGYSNSLGDALTITNNVSISEEKEQGEI* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2534 384 PANTHER - 65 381 - -
Tpr7g2534 384 Pfam Myb/SANT-like DNA-binding domain 266 354 IPR044822 -
Tpr7g2534 384 ProSiteProfiles Myb-like domain profile. 266 325 IPR001005 -
Tpr7g2534 384 Gene3D - 268 330 - -
Tpr7g2534 384 MobiDBLite consensus disorder prediction 41 61 - -
Tpr7g2534 384 MobiDBLite consensus disorder prediction 41 115 - -
Tpr7g2534 384 CDD GT1 266 331 - -
Tpr7g2534 384 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 65 381 - -
Tpr7g2534 384 Coils Coil 131 151 - -
Tpr7g2534 384 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2534 Tpr-Chr7 32614307 32616668 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2534 110 357 Trihelix Transcription Factor Family AT5G47660 43.548 1.32e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr7g2534 Myb_DNA-bind_4 3.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2534 - - mtr:MTR_2g026725 444.891