Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2515 ATGGACTCGAAAACTAGTGCTAGAGCTCTCTCGAAACAACAACACAAAACATCTGGGATTCAAACACCTGAGGCGAAAGACCTTCAGTTTTCTTCGCTGTCGCTTCAAACACCTGAGTCTAAGTCTGTACAGAACACGCCAAAGCAGAATATTGGAGAAATTTATGAAAGCAAGAAGTTTGGAGGTTCAATCCAAAAGGGTTCTGCTGATTCATTGAGTAATAAATTTGGTTCTGGTGCTTCTTCATCCGCACTTGGCAAAGCATCCGGAGAGAACATAGGCTCACAGGAAAGCTCTATTAATCAAGACAAGAAGACCTCAGAATATGGCAGTGTGAAGAGCAGTTCGGTTTCTGCCAAAGCTAGTGACGGGACCAGCAGTATTGCAAAGACAAGTGGTAGTGCTAAGATCAGTGACCGAGCTGATTTAGTTGAGAGTGGTAAGAGCAGTATTTGCCGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCGTAAACAAGCCTCACAAGGCAAATGACATGAGATGGGAAGCTATCCAAGTGGTTAGAACTAGGGACGGAGCATTGGGTTTAGGCCACTTTAGACTTCTCAAGAGGTTGGGCTGTGGAGATATCGGCAGTGTTTACCTCTCTGAGTTGAGTGGGACTAAATGTTACTTTGCGATGAAGGTGATGGACAAAGGGTCGTTAGCAAGTCGTAAGAAGTTACTTCGTGCTCAGACGGAACGGGAAATTCTTCAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAGACGGAGAAGTTTTCATGCTTGGTGATGGAATTCTGCCCGGGTGGAGACCTCCATACTCTTCGGCAGAAACAACCAGGGAAGCACTTTCCTGAGCAGGCAGTAAAATTTTACGTGGCAGAGGTCCTACTGGCGATGGAGTACCTACACATGCTTGGGATTGTATACCGTGATCTTAAGCCAGAAAATGTCCTCGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTCCGATGTGCTGTTAGTCCAACCCTCGTTAAATCCTCTTCAATGGATTCGGAGCCTTTAAGAAAGAATACTGGTTACTGTGCTCAGCCTGCGTGTATTGAGCCGCCGTCCTGCATTCAGCCATCCTGTGTTGCTCCTACCTCGTGTTTTTCACCCCGTCTCTTTTCTAGCAAATCAAAGAAAGAACGGAAGCCCAAAACTGAACTTGGCAATCAAGTTAGTCCTCTACCTGAGCTCATTGCAGAGCCGACCGATGCTCGGTCTATGTCGTTTGTCGGAACCCACGAATACTTGGCACCTGAGATAATCAAGGGTGAAGGTCACGGGAGTGCAGTTGATTGGTGGACTTATGGAATCTTTCTATACGAGTTGTTGTTCGGGAAAACTCCATTTAAGGGATCTGGGAACCGAGCCACGCTGTTTAATGTGGTAGGTCAGCCGCTAAGATTTCCCGAAGCACCTGTCGTTAGCTTCGCAGCAAGGGATCTTATTAGAGGTTTGCTTGTAAAGGAACCTCAACACAGATTGGCATATAAAAGAGGCGCAACCGAGATTAAGCAACATCCATTTTTCGAAGGTGTGAATTGGGCATTGATCCGATGTGCTACCCCACCCGAGATTCCAAAGGCTGTTGAGTTTGAGAAGATACCTTCACCGGCCACCTCTTCTGCCAGCGAAAAGACTGTTGTTAACCACATGCCAACAGCTCCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1803 0.4609 MDSKTSARALSKQQHKTSGIQTPEAKDLQFSSLSLQTPESKSVQNTPKQNIGEIYESKKFGGSIQKGSADSLSNKFGSGASSSALGKASGENIGSQESSINQDKKTSEYGSVKSSSVSAKASDGTSSIAKTSGSAKISDRADLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDMRWEAIQVVRTRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSMDSEPLRKNTGYCAQPACIEPPSCIQPSCVAPTSCFSPRLFSSKSKKERKPKTELGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPATSSASEKTVVNHMPTAPNQKGSDNYLEFDFF* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2515 600 SUPERFAMILY Protein kinase-like (PK-like) 176 580 IPR011009 -
Tpr7g2515 600 SMART serkin_6 202 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2515 600 MobiDBLite consensus disorder prediction 1 52 - -
Tpr7g2515 600 Pfam Protein kinase domain 203 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2515 600 Pfam Protein kinase domain 437 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2515 600 Gene3D Phosphorylase Kinase; domain 1 200 285 - -
Tpr7g2515 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Tpr7g2515 600 MobiDBLite consensus disorder prediction 78 132 - -
Tpr7g2515 600 MobiDBLite consensus disorder prediction 1 60 - -
Tpr7g2515 600 Gene3D Transferase(Phosphotransferase) domain 1 434 558 - -
Tpr7g2515 600 PANTHER FLIPPASE KINASE 1-RELATED 3 600 - -
Tpr7g2515 600 Gene3D Transferase(Phosphotransferase) domain 1 286 354 - -
Tpr7g2515 600 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 600 - -
Tpr7g2515 600 CDD STKc_phototropin_like 201 558 - -
Tpr7g2515 600 ProSiteProfiles Protein kinase domain profile. 202 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2515 Tpr-Chr7 32428713 32432831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2515 25 600 AGC Kinase Gene Family AT5G47750 76.950 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr7g2515 Pkinase 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2515 K08286 - gmx:100798088 997.653