Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2497 ATGTATCATCCAACGAATGTTCCTGATTTGAGTTTAATCGGAAGCAATTCATTAGTTCATGGTCAGCACATAGATTCTGGTAGGAGCACAATGGATCCTGGTAATGGAGGAAACAGTCTTGCCAACAACTCTAATGTCAACTCAAAACAACGTTTACGCTGGACACATGAGCTACATGAACGCTTTGTTGATGCTGTAGCTCAACTTGGTGGGCCAGATCGTGCCACACCCAAAGGTGTCCTCCGAGTTATGGGTGTACAAGGCTTAACCATTTACCATGTTAAGAGTCATTTGCAGAAATACCGACTAGCAAAATACTTGCCTGACTCCTCATCTGATGAAGGGAAAAAGGCTGACAAGAAAGAAACGGGGGATATGCTTTCCAATCTAGATGGTTCATCGGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGACTTCATGAACAATTGGAGGTGCAGAGACAGCTACAATTAAGGATAGAAGCTCAGGGAAAATATTTGAAAAAGATAATTGAAGAGCAACAGCGACTCAGCGGGGTTCTTTCACCCGGCTCTGGTGTTGCAGCACCAACTCCAGGAGATGTGTGCCAACAAGAACTCGACAATAAGACTGAGCCGGCAACCCCCGACCCAGAAAAAGCTGCTAAAGAACATGCACCAGCAAAGAGTCTTTCAGTTGAATCTTTCTCATCTCACCATGAACCGATGACACCGGATTCCGGTTGCCAAGTTGGTTCTCCTGCTGACAGTCCTAATGGAGAGAGATCAACTAAAAAGCAACGAGTAAGCGTGGAAGGAGGAGCGTATTCAAAATCAGATATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGCCATCATACCAGCAACAGACCACTGTTTTCCTTACTCATGATCACTTTAATCCGTCTTTAGGTATGTCTACAAGAAGTGGTGAGGAATTCGACAAGCTTGGTGTCGGGAATATGTGA 990 0.4495 MYHPTNVPDLSLIGSNSLVHGQHIDSGRSTMDPGNGGNSLANNSNVNSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSPGSGVAAPTPGDVCQQELDNKTEPATPDPEKAAKEHAPAKSLSVESFSSHHEPMTPDSGCQVGSPADSPNGERSTKKQRVSVEGGAYSKSDMVLPHQILESSMPSYQQQTTVFLTHDHFNPSLGMSTRSGEEFDKLGVGNM* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2497 329 MobiDBLite consensus disorder prediction 230 259 - -
Tpr7g2497 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 321 IPR044848 GO:0003700
Tpr7g2497 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 321 - -
Tpr7g2497 329 MobiDBLite consensus disorder prediction 211 226 - -
Tpr7g2497 329 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Tpr7g2497 329 SUPERFAMILY Homeodomain-like 48 103 IPR009057 -
Tpr7g2497 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 106 IPR017930 -
Tpr7g2497 329 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Tpr7g2497 329 MobiDBLite consensus disorder prediction 206 276 - -
Tpr7g2497 329 Gene3D - 48 107 - -
Tpr7g2497 329 Coils Coil 139 159 - -
Tpr7g2497 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2497 Tpr-Chr7 32230937 32239983 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2497 84 329 G2-like Transcription Factor Family AT2G01060 62.205 5.31e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr7g2497 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2497 - - gmx:100786925 507.294