Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2481 ATGGGCTCGGAGAATGAAATTTCTCCGGCCGATGCTCATCGAGCACCTCCAGGCAAAGAACAACAAGCCGCCGGCGTCGGAATCCTTCTTCAGATCATGATGTTAGTTTTATCCTTCGTTCTCGGTCATGTTCTCCGTCGCAAAAAGATTTACATCATTCCTGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTGTTTTAGCTAATATTTCAGATACTGAAACTAATATCAGGGCTTGGTTCAATTTTCACGAGGAGTTTTTTTTCCTATTCCTGTTGCCTCCGATCATATTTCAGTCTGGTTTCAGTCTTGCACCTAAACCTTTTTTCTCAAATTTTGGTGCAATTGTGACATTTGCTATATTTGGTACCTTTCTAGCTTCAATTGTAACGGGTGTCTTGGTTTATGTTGGTGGGTTGGTCTTCCTCATGTATAAACTACCTTTTGTTGAGTGCCTGATGTTTGGTGCTCTTATATCAGCAACCGATCCTGTTACTGTTTTGTCCATATTCCAGGAGCTGGGCACAGATGTCAATCTATATGCTTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATTGGTTAGAAATAATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCTTTGTCTACAGGTGTTGGAGTTGGGTTTACATCTGCTTTGCTATTTAAGTATGCAGGCTTGGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTGTTCCCTTATTTCTCGTACATGTTGTCTGAAGGCCTTGGTTTGTCCGGTATTGTATCAATATTATTCACAGGAATTGTCATGAAGCACTATGCGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCCTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTATATTTATATACATGGGCTTTGACATTGCTATGGAAAAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCCATTATATTCATTATAATTGCAAGAGCTGCAAATGTCTTCTCTTGTGCTTACCTGGTCAATCTGGTCAGACCTGCTCATCGAAAGATACCTGCAAAACACCAGAAAGCTCTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAATTCATGATCTTCCAGAAGGACATGGACAGACCATATTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTAACATGCTGGAAGCTCTAGAGGTCATAGGTGGTGACACTCACAGCGATAGCTCTTTGGCTTCAGTTGGTCCCATCACAAATTACGGGGGGAACAATGGTTATGTTGCTCCTTCATACGAGGAGGAGGAGGAAGAATCGTCGTCGTCTGGGAACAAAATAAAGATGAAGCTAAAAGAATTACACAAGAGTGCTGCATCTTTTACGGCATTAGATAGAAACTATCTTACCCCATTCTTTACAAGCCAAAATGGAGAGGAGGATGAAGAAGCCGAGCCTCTTAATTCTTCGAGATCTTCTTTTACTTCTTCAAGATCAGGATTTCACGGCCAGAGCCCTTATTCATCGTGA 1647 0.4074 MGSENEISPADAHRAPPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGVLANISDTETNIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYVGGLVFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVRNNPSGQNFFMVVVRFLETFVGSLSTGVGVGFTSALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLSEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFVSAFFELISSLAETFIFIYMGFDIAMEKHSWSHVGFIFFSIIFIIIARAANVFSCAYLVNLVRPAHRKIPAKHQKALWYSGLRGAMAFALALQSIHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGNMLEALEVIGGDTHSDSSLASVGPITNYGGNNGYVAPSYEEEEEESSSSGNKIKMKLKELHKSAASFTALDRNYLTPFFTSQNGEEDEEAEPLNSSRSSFTSSRSGFHGQSPYSS* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2481 548 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 32 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr7g2481 548 Pfam Sodium/hydrogen exchanger family 34 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr7g2481 548 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr7g2481 548 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr7g2481 548 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr7g2481 548 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr7g2481 548 PANTHER SODIUM/HYDROGEN EXCHANGER 16 525 IPR018422 GO:0006812|GO:0015299|GO:0016021
Tpr7g2481 548 MobiDBLite consensus disorder prediction 512 548 - -
Tpr7g2481 548 Gene3D - 151 202 - -
Tpr7g2481 548 PANTHER SODIUM/HYDROGEN EXCHANGER 6 16 525 - -
Tpr7g2481 548 MobiDBLite consensus disorder prediction 527 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2481 Tpr-Chr7 32078016 32087348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2481 32 523 Antiporters AT5G55470 30.189 8.91e-52 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2481 K14724 - gmx:100790830 879.011