Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2467 ATGGCAAACCAAAACAGAGAAGAAGTAGTTTGCGTAACCGGAGCAAACGGTTTCATCGGAACATGGCTAGTAAAAACCCTACTAGAAAAACAAACCCCACGCTACAAAATCAACGCCACAATCTTCCCTAATTCCGATCCATCTCATCTCTTCACACTCCATCCGGAAGCCCAATCTCGCATCACAATTTTCCCTGTCAACATTCTCGACTCCACCGCTGTCTCCTCCGCCATCAAAAACTGCTCCGGCGTCTTTCATGTCGCATCCCCATGTACCCTCGAAGATCCAACCGATCCACAAAAGGAGCTTCTAGAACCTGCTGTACAAGGAACCCTAAATGTTCTAGAAGCATCCAAGCGCGCCGGTGTTAAGCGTGTCGTTCTCACTTCCTCGATTTCGGCAATGGTACCAAACCCTAATTGGCCGGAGAAAAAGGCGATCGATGAGACGTCGTGGACGGATGTTGAGTACTGTAAATTGAGGGGGAAGTGGTATCCGGTGTCGAAGACCGAGGCGGAGAAGGCGGCGTGGGAATTTCGAGAGAAAAATGATGGTATTGATGTGGTGGCAGTTCATCCAGGGACTTGTTTGGGAGAGTTGATACAGAAGGAGATGAATGCAAGTTCGGCGGTGTTGCAGAGGTTGATGAAAGGGAGTGAGGATACTCAAGAGTGTTATTGGTTGGGGGCTGTTCATGTTAAAGATGTTGCTAAAGCTCATGTTTTGGTTTATGAAACTCCAACTGCTGCTGGTAGATATCTCTGTGTTAATGGGATATATCAGTTTTCTAGTTTTGCTAAAGTTGTCTCTGAATTGTATCCTGATTTTCCTATTCACAGGTTCCCAGATGAAACTCAACCTGGTTTGACACCATGTAAAGATGCAGCAAGGAGGCTAATAGACTTGGGATTAGTCTTCACACCAATCCAAGATGCTATTAGAGAAGCAGCAGAGAGCCTTATGGCTAAAGGCTTCCTGCAGAGAACCCCCTCACAGAGAGCCTTATGA 1008 0.4663 MANQNREEVVCVTGANGFIGTWLVKTLLEKQTPRYKINATIFPNSDPSHLFTLHPEAQSRITIFPVNILDSTAVSSAIKNCSGVFHVASPCTLEDPTDPQKELLEPAVQGTLNVLEASKRAGVKRVVLTSSISAMVPNPNWPEKKAIDETSWTDVEYCKLRGKWYPVSKTEAEKAAWEFREKNDGIDVVAVHPGTCLGELIQKEMNASSAVLQRLMKGSEDTQECYWLGAVHVKDVAKAHVLVYETPTAAGRYLCVNGIYQFSSFAKVVSELYPDFPIHRFPDETQPGLTPCKDAARRLIDLGLVFTPIQDAIREAAESLMAKGFLQRTPSQRAL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2467 335 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 315 - -
Tpr7g2467 335 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 8 315 - -
Tpr7g2467 335 Pfam NAD dependent epimerase/dehydratase family 10 249 IPR001509 -
Tpr7g2467 335 CDD FR_SDR_e 10 304 - -
Tpr7g2467 335 Gene3D - 1 334 - -
Tpr7g2467 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 319 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2467 Tpr-Chr7 31918812 31926733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2467 7 326 Monolignol Biosynthesis Gene Families AT2G02400 63.438 1.08e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2467 - - gmx:100795399 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2467 7 31918812 31926733 Tpr7g2467 7 31918812 31926733 ECH