Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2464 ATGTCAAGCGGTGATACCATGTGTTCTCTAAATGATAAGGACTTGTGTCTGAACCCTAATCTTGATATCACGATAGATGAAGGATCTCCAAACACTGAACAACTACTTGAGGTTGTGGACGAGGGCAACGAGCTTGAGAATGGTTGTAGTCAATTGTTTGGGCTTGATGGAAGCGAACATGAAAATGGACGAGATGAAACAACTGTAGTTGACAGTCACAATGGAGAATCTCAAGGAAAAAAAGACTACACCCAACCTGTTGTGGGAATGGAGTTTGAAACTTACGATGATGCCTATAACTATTATAATAGCTATGCTAGGGAGATTGGATTTGCTATTCGGGTCAAATCTTCGTGGGCCAAACGTAACAGTAAAGAGAAGCGTGGTGCTGTCTTGTGCTGTAACTGTGAGGGTTTCAAAACAATTAAAGAAGCTAATAGTCATAGGAAAGAAACAAGAACAGGCTGTCTAGCAATGATTAGATTGAGATTAGTGGAATCTAACATGTGGAGGGTCGATGAAGTTAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGCTCAAAACTCTAAATCGCATAAGAGGACGGACAGTGGAACCAAAAGAAAAGTTGAGCCAACTCTTGATGTTGAAGTACGGACAATCAAGTTATATCGCCCACCAACTGTAGATGCTTCCGGTTATGGGAGCTCAAATTCTAATGAAGGAGGAACTAGCAACAATGTTAAATTTTCCAGGAGTTTGAAACTTAAAAAAGGCGATGCAAAACTGATTTCAAATTACTTCTGCCACTGTCAACTCACGAGTCCTAACTTTTTCTATGTGATGGATCTAAATGATGATGGACAACTAAGGAACATATTTTGGATTGATTCTAGATCTAGGTCTGCATTTAATTATTTTGGTGATGTGGTTGCATTCGACTCAACATATTTGTCGAACAATTATGAGATTCCCCTTGTTGCATTTGTTGGTGTTAATCACCACGGTCAATCTGTTTTGCTAGGATGTGGTATGCTTGCAGATGAGACATTTGAAACATATATTTGGTTATTTAGGGCATGGCTTACTTCTATGTCTGGTCGCCCTCCACAAACTATTGTTACAAACCAATCTAAGACCGTGCGAAGTGCAATAGCAGAGGTTTTTCCGAGGGCTCACCATAGAATTTGCCTACTACAAGTAATGCAGAGTATCTGTGGATTTATGGTGCAGTTTCAAGAATATGAGGCGCTTCAGATGGCGCTAACAAAAGTCATATATGACCCTAAAACAATAGATGAATTTGAAAGGGATTGGGATGCCCTGATCCAGCATTTTGGAATAAGAAATCACGAAAAGCTCCAAACCTTGCATGAGGAACGAGAACACTGGGCTCCAGTTTACTCCAAGGACACATTTTTTGCTGGAATTTATGATTATGAAAAGGGTGAATCTGTGGTTCCGTATTTCAAGGGTCATGTGCATCAACAAACTTCTTTGAAAGATTTTTTTGAGATTTATGAATTAGTTCAACAACAGAAGCAAAAAACTGAAGCTCTTGATGATTTGGAGTCGCAAAATTCAAACCGGTTACTAAAAACAAGTTGCTACTATGAGCTGCAACTCTCTAAATTGTACACAAATGCAATATTCAGGAAGTTGCAAGATGAGGTGGTAATGATGTCTTCCTGTTTCTGCGTCTCACAAGTTCAAACAAACGAGTCTATAGTAACATACATGGTAAAAGAAGATCAAGGAAAAGATCAAGGAGAAGAACCAGTAAGAGATGATAGGCATTTTGAAGTGCTGTATGATAAAGCGGTAGCCGAAGTACGCTGCATTTGTAGTTGCTTTAACTTCAAAGGATACCCATGCAGGCATGCCTTGTATATCCTTAATTGCAATGGCGTGGAGGAAATTCCACGTCAATATATTTTGTCTAGATGGAGGAAAGATTTTAAGCGATTGTATGTACCACATCTCAACTCAGATGATGTTGATATTACCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGTGCTATGCAAGTAGTTGAAGAAGGCATGATTTCCGAAAATCATTATATAGTTTCTTGGCAGACATTTAAAGAGTCTTTGAATAAGATTCGCCGGACAAGTTTGAATATATAA 2139 0.389 MSSGDTMCSLNDKDLCLNPNLDITIDEGSPNTEQLLEVVDEGNELENGCSQLFGLDGSEHENGRDETTVVDSHNGESQGKKDYTQPVVGMEFETYDDAYNYYNSYAREIGFAIRVKSSWAKRNSKEKRGAVLCCNCEGFKTIKEANSHRKETRTGCLAMIRLRLVESNMWRVDEVKLEHNHSFDPERAQNSKSHKRTDSGTKRKVEPTLDVEVRTIKLYRPPTVDASGYGSSNSNEGGTSNNVKFSRSLKLKKGDAKLISNYFCHCQLTSPNFFYVMDLNDDGQLRNIFWIDSRSRSAFNYFGDVVAFDSTYLSNNYEIPLVAFVGVNHHGQSVLLGCGMLADETFETYIWLFRAWLTSMSGRPPQTIVTNQSKTVRSAIAEVFPRAHHRICLLQVMQSICGFMVQFQEYEALQMALTKVIYDPKTIDEFERDWDALIQHFGIRNHEKLQTLHEEREHWAPVYSKDTFFAGIYDYEKGESVVPYFKGHVHQQTSLKDFFEIYELVQQQKQKTEALDDLESQNSNRLLKTSCYYELQLSKLYTNAIFRKLQDEVVMMSSCFCVSQVQTNESIVTYMVKEDQGKDQGEEPVRDDRHFEVLYDKAVAEVRCICSCFNFKGYPCRHALYILNCNGVEEIPRQYILSRWRKDFKRLYVPHLNSDDVDITNPVQCFDHLYKRAMQVVEEGMISENHYIVSWQTFKESLNKIRRTSLNI* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2464 712 SMART 26again6 606 633 IPR006564 GO:0008270
Tpr7g2464 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 32 707 - -
Tpr7g2464 712 ProSiteProfiles Zinc finger SWIM-type profile. 595 631 IPR007527 GO:0008270
Tpr7g2464 712 Coils Coil 504 524 - -
Tpr7g2464 712 MobiDBLite consensus disorder prediction 181 205 - -
Tpr7g2464 712 Pfam SWIM zinc finger 600 624 IPR007527 GO:0008270
Tpr7g2464 712 Pfam FAR1 DNA-binding domain 100 184 IPR004330 -
Tpr7g2464 712 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 707 IPR031052 GO:0006355
Tpr7g2464 712 Pfam MULE transposase domain 305 398 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2464 Tpr-Chr7 31886209 31891225 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g2464 MULE 3.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2464 K17604 - gmx:100796448 1183.7