Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2463 ATGTCGGAGTTCCACACCCAAAATCTTGTTACCGTCGATTCTCAACCTCCACCAGAACATGAACAACAACACTTTAAGATGGACGATATTTCTCTGTGCTGTGATCAAATACCAGATGGAGAAGGCATTGATATTCTAAAAGATGAAGATGATGTAGTAATTGAATTAGATTGTCAAAATGATCTTTCTGAAGGAAGAAAAGAATTTCTCGCACCTGCTGTCGGAATGGAATTTGAGTCATATGATGATGCTTACAATTATTATATTTGTTATGCCAAGGAGGTGGGATTTTGTGTGAGGGTGAAGAATTCATGGTTCAAGAGAAATAGTAGAGAAAAATACGGTGCAGTGCTTTGCTGTAGCAGTCAAGGTTTCAAAAGAATAAAAGATGCTAGCAATTTGAGAAAAGAGACAAGAACTGGTTGTCCTGCGATGATAAGGATGAGATTAGTGGAGTCTCAGAGATGGAGGATACGTGAAGTTACCCTCGAACATAACCACATCTTAGGTGCTACGATACATAAATCAATTAAAAATATGGGAAGTGGAACTAAAAAGAAGCTGTTGCCAAGTTGTTTTAATGCTGAGGGGCAAACAGTTAAGTTATATCGTGCACTTGTGATAGATGCAGGAGGTAATGGTAATTCAAATTTCAATGCAAGAGACGATAAAACTTTCTCTGAATATTCTAATGAGATGAACCTAAAAAAAGGTGATGCACAAGCCATTTATAATTTCCTTTGCCGTATGCAACTGACTAATCCAAACTTCTTTTATTTAATGGATTTCAACGATGAAGGGCGTTTGAGGAATGTCTTATGGGTTGATGCCAGGTCCAGGGCTGCATGTGGTTATTTTAGTGATGTCGTTTATTTTGACAACACTTATTTGTCAAACAAATATGAAATTCCTCTTGTAGCTTTTGTTGGACTAAATCACCATGGTCAAACAGTGTTATTAGGTTGTGGGCTGCTTGCAGGTGAAATGCCCGAATCATATACATGGTTGTTTAGAACATGGGTTACATGTATGTCAGGATGTTCTCCTCAAACTATTATTACAGATAGGTGCAAGGCTTTACAGAGTGTAATTGCAGAAATTTTTCCGAAATCTCATCATTGTTTTGGCTTGTCATTAATTATGAAAAAAGTACCAGAAAAATTGGGAGGGTTGCACAATTATGATGGAATCAGGAAAGCATTGATTAAAGCAGTTTATGAGACATTGAAAGTGATTGAATTTGAGGCCGCATGGGGATTTATGATTCAACGTTTTGGAGTTAGTGATCACGAGTGGCTTCGTTCCTTATATGAAGACCGAGTTCATTGGGCACCAGTATATTTAAAGGACAAGTTTTTTGGTGGAATGTCTGCGGCACGCCCCGGTGAGAGTATTAGTCCATTTTTCGATAAATATGTGCACAAACAGACTCCTCTGAAGGAGTTTCTTGACAAGTATGAATTAGCTCTTCATAAGAAGTACAAGGAAGAATCTTTAGCAGATATTGAATCAAGAAGCTCAAGCCCCCTGCTTAAAACCAAATGTTCATTTGAACTGCAGCTCTCTAGAATGTACACAAAAGAAATATTCACCAAGTTCCAATTTGAAGTGGGAGAAATGTTCTCTTGTTTTGGTACGACTCAATTACACGTGGATGGTGCCATCGTAATCTTCTTAGTCAAAGAGCGTGTTTTGATCGAGGGAAACAGGCGAGAGATCAAGGATTTTGAAGTTTTGTACAGTAGATCAGCAGGTGAAGTTCGTTGTATTTGTTGTTGCTTTAATTTTTATGGATATCTATGTCGACATGCACTGTGCGTACTCAATTTTAATGGGGTGGAAGAGATTCCTCCTAAGTATATTCTTTCACGGTGGAAGAAAGATTACAAACGCCTTTATATTCCGGATCACACTTTTGGTAGTTCTGATGATACTGATCGTATTCACCGGTCTAACCAGTTATTTAGAGGTGCCTTACAAGTTGTAGAGGAGGGAGTACTTTCTGTAGACCATTACAATATAGCGTTGCAGGCTTTAGAAGAATCCCTTATTAAGGTCTGTGATGTAGAACAGGGACATGATGGCGAAGGATTTGATTTGATGATGTTGGAGTTCCAGACCCAAAATCTTGTTACCATCGACGCCGCCGTCGATTCTCAACCTCCACGAGAAGAAGAACAAGAACAACACTTAAAGATGGACGATACTTCTCTGTACTGCGATCAAATACCAGATGCAGATGATGTACTAATTGAATTAGACTGTCAAAATGATCCTTCTGAAGGAAGAAAGGAATTTCTCGCACCTGCTAGTAGAATGGAATTTGAATCATACGATGATGCTTACAATTATTATATTTGTTATGCCAAGGAGGTGGGATTTTGTGTGAGGGTGAAGAATTCATGGTTCAAGAGAAATAGTAGAGAAAAATACGGTGCAGTGCTTTGCTGTAGCAGTCAAGGTTTCAAAAGAATAAAAGATGTTAACAGTTTCAGAAAAGAGACAAGAACTGGTTGTCCTGCGATGATAAAGATGGGGTTAGTGGAGTCTCAGAGATGGAGGATACACGAGGTTACCCTCGAACATAACCACATCTTAGGTGCTACGATACATAAATCAATTAAAAATGTGGGAATTGGGACTAAAAAGAAGTTGTTGCCTAGTTGTTCAAATGCTGAGGTTCAAACAGTTAAGTTATATCGTGCACTTGTGATAGATGCGGGAGGTAATGGTAATTCAAATTCCAATGCAAGAGACAATAAAACTTTCTCTGAATATTCTAATGAGTTGAATCTAAAAAAAGGTGACGTGCAAACCATTTATAATTTCCTTTGCCGTATGCAACTGACTAATCCAAACTTCTTTTATTCAATGGATTTCAACGATGAAGGGCATTTGAGGAATGTATTATGGGTTGATGCCAGGTCCAAGACTGCATGCGGTTATTTTGGTGATGTTATTTATTTTGACAACACTTATTTGTCAAACAAATATGAAATTCCTCTTGTGGCTTTTGTTGGAATAAATCAACATGGTCAAACAGTGTTATTAGGTTGTGGGCTGCTTGCAGGTGAAACGATCGAATCATATACATGGTTGTTTAGAACATGGGTTATGTGTATGTCAGGATGTTCTCCTCAAACTATTATTACAGATAGGTGCAGGGCTTTGCAGATTGCAATTGCAGAAATTTTTCCGAAATCTCATCATTGTTTTGGCTTGTCATTAATTATGAAAAAAGTACCTGAAAAATTGGGAGGGTTGCACAATTACGATGCAATCAGGAAAGCATTGATTAAAGCAGTTTATGAGACATTGAAAGTGATTGAATTCGAGGCAGCATGGGGGGTTATGATTCATTGTTTTGGAGTTAGCGATCACGAGTGGCTTCGTTCCTTATATGAAGACCGAGTTCATTGGGCACCAGTATATTTAAAGGACAAGTTTTTTGGTGGAATGACTGCGGCACGTCCCGGTGAGAGTGTGTGTCCATTTTTCGATAAATATGTGCACAAACAGACTCCTTTGAAGGAGTTTCTTGACAAGTATGAATTAGCTCTTCATCAGAAGTACAAGGAAGAATCTTTAGCAGATATTGAATCAAGAAGCTCAAGCCCCTTGTTAATAACCAAATGTTCTTTTGAACTGCAGCTTTCTAGAATGTACACAAAAGAAATATTCACGAAGTTCCAATTCGAAGTGGGAGAAATGTTCTCATGTTTTGGTACGACTCAACTACACGTGGATGGTCCCATCATAATCTTCTTGGTCAAAGAGCGTGTTTTGACCGATGGAAACAGACGGGAGATTAAGGATTTCGAAGTTTTGTACAATAGATCAGCAGGTGAAGTTCGTTGTATTTGTTGTTGCTTTAACTTTTATGGATATCTATGTCGACATGCACTGTGTGTACTCAATTTTAATGGGGTGGAAGAGATTCCGCCTAAGTACATTCTTTCACGGTGGAAGAAAGATTACAAACGTCTTTATATTCCTGATCACAATTTTGGCAGTTCTGATGATACTGATCGTATTCACCGATCTAATCAGTTATTTAGAAGTGCCTTACAAGTTGTAGAGGAGGGAATACTTTCTGTAGACCATTACAATGTAGCGTTGCAGGCTTTTGAAGAATCGTTTATTAAGGCCCGTGATGTAGAGTAA 4164 0.3828 MSEFHTQNLVTVDSQPPPEHEQQHFKMDDISLCCDQIPDGEGIDILKDEDDVVIELDCQNDLSEGRKEFLAPAVGMEFESYDDAYNYYICYAKEVGFCVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDASNLRKETRTGCPAMIRMRLVESQRWRIREVTLEHNHILGATIHKSIKNMGSGTKKKLLPSCFNAEGQTVKLYRALVIDAGGNGNSNFNARDDKTFSEYSNEMNLKKGDAQAIYNFLCRMQLTNPNFFYLMDFNDEGRLRNVLWVDARSRAACGYFSDVVYFDNTYLSNKYEIPLVAFVGLNHHGQTVLLGCGLLAGEMPESYTWLFRTWVTCMSGCSPQTIITDRCKALQSVIAEIFPKSHHCFGLSLIMKKVPEKLGGLHNYDGIRKALIKAVYETLKVIEFEAAWGFMIQRFGVSDHEWLRSLYEDRVHWAPVYLKDKFFGGMSAARPGESISPFFDKYVHKQTPLKEFLDKYELALHKKYKEESLADIESRSSSPLLKTKCSFELQLSRMYTKEIFTKFQFEVGEMFSCFGTTQLHVDGAIVIFLVKERVLIEGNRREIKDFEVLYSRSAGEVRCICCCFNFYGYLCRHALCVLNFNGVEEIPPKYILSRWKKDYKRLYIPDHTFGSSDDTDRIHRSNQLFRGALQVVEEGVLSVDHYNIALQALEESLIKVCDVEQGHDGEGFDLMMLEFQTQNLVTIDAAVDSQPPREEEQEQHLKMDDTSLYCDQIPDADDVLIELDCQNDPSEGRKEFLAPASRMEFESYDDAYNYYICYAKEVGFCVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNSFRKETRTGCPAMIKMGLVESQRWRIHEVTLEHNHILGATIHKSIKNVGIGTKKKLLPSCSNAEVQTVKLYRALVIDAGGNGNSNSNARDNKTFSEYSNELNLKKGDVQTIYNFLCRMQLTNPNFFYSMDFNDEGHLRNVLWVDARSKTACGYFGDVIYFDNTYLSNKYEIPLVAFVGINQHGQTVLLGCGLLAGETIESYTWLFRTWVMCMSGCSPQTIITDRCRALQIAIAEIFPKSHHCFGLSLIMKKVPEKLGGLHNYDAIRKALIKAVYETLKVIEFEAAWGVMIHCFGVSDHEWLRSLYEDRVHWAPVYLKDKFFGGMTAARPGESVCPFFDKYVHKQTPLKEFLDKYELALHQKYKEESLADIESRSSSPLLITKCSFELQLSRMYTKEIFTKFQFEVGEMFSCFGTTQLHVDGPIIIFLVKERVLTDGNRREIKDFEVLYNRSAGEVRCICCCFNFYGYLCRHALCVLNFNGVEEIPPKYILSRWKKDYKRLYIPDHNFGSSDDTDRIHRSNQLFRSALQVVEEGILSVDHYNVALQAFEESFIKARDVE* 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2463 1387 Pfam FAR1 DNA-binding domain 86 169 IPR004330 -
Tpr7g2463 1387 Pfam FAR1 DNA-binding domain 783 866 IPR004330 -
Tpr7g2463 1387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 44 690 - -
Tpr7g2463 1387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 741 1385 - -
Tpr7g2463 1387 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g2463 1387 ProSiteProfiles Zinc finger SWIM-type profile. 1273 1309 IPR007527 GO:0008270
Tpr7g2463 1387 SMART 26again6 1284 1311 IPR006564 GO:0008270
Tpr7g2463 1387 SMART 26again6 587 614 IPR006564 GO:0008270
Tpr7g2463 1387 Pfam MULE transposase domain 986 1080 IPR018289 -
Tpr7g2463 1387 Pfam MULE transposase domain 289 383 IPR018289 -
Tpr7g2463 1387 ProSiteProfiles Zinc finger SWIM-type profile. 576 612 IPR007527 GO:0008270
Tpr7g2463 1387 Pfam SWIM zinc finger 583 608 IPR007527 GO:0008270
Tpr7g2463 1387 Pfam SWIM zinc finger 1283 1305 IPR007527 GO:0008270
Tpr7g2463 1387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 690 IPR031052 GO:0006355
Tpr7g2463 1387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 741 1385 IPR031052 GO:0006355
Tpr7g2463 1387 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2463 Tpr-Chr7 31876343 31885324 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g2463 MULE 1.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2463 - K17604 gmx:100796448 1831.99