Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2455 ATGGAATCCGGTGACGGTTACGGCGGAAGAAAAGAAACTCAACAAACTTCCGACGAGGTGATTCTTCAACCAGAATGGAGACGCCGAACTGCTTCCACCGGAAGAGACCAAAACCTTACTCTCCAACCAGAATGGAGGCGAGGTAGGTCAACCGCTTCTCCTTCTCCTTCCGGTGCCGGCGATGAAGTTCAAAAGAAAGAAGAAGAACAGAAAAAGGAGATTCTCTTTCAACCGGAATGGCGAAGCTCAAAGGTGAATGCTAGTGGTGTTTGGGAACCAGAATGGAGACGATCAAGGTCTACTGCTACTGCTACTGCTTATCCATGGAATCAAAATTATGGTGTGAGGAAATCGGTAGGATCGAGTTCTGGTGGTGTTCAAAGAGGTAGAAACATTGATGAATCGCGGCGAAATGCTCCAGCATTAGTAGATGACGCCGTTCCCAAACTGGAAAGACTGCAAATATCGGACAATTTAGCTACAGCATCTTCTTCACTTGAAAAAAAGGATAAAACTTTGCCTATTCGGAGACCTGACAATGGTGGCACGTTAGCGGTTCTTACACGCACACTCCGTGTCAATCATTTTCCTGTTAAGTTCAATCCAGATAGTATAATATTTCATTATAATGTTAATGTCAAATCGAAGTTTTCTTCAAAAGTTGGCCAGCCTCGTAAGTTATCTAATGCTGATCTGTCCGTGATTAGAGAGAAATTGTTTTCTGATGATCCTGAGAGGTTTCCCTTGGATATGACTGCACATGACGGTGCAAAAAATATCTTTAGTGCAGTGCAGTTACCAGAAGAGACCATTACTGTGGAGATCTCTGAAGGAGAGGATGAAAAGATCACTTTATATAGTGTTACCCTGACACTTCTTAATAAACTCAGACTTTGCAAGTTAATGGACTATCTTTGTGGGCATTCATTCTCTCTTCCCAGGGATATTTTGCAAGGGATGGATGTGGTGATAAAAGAGAATTCCAATAGGTGCACAATTTCTGTGGGACGATACTTCTATCCCACAAATCCTCCTCTGGTAATGAAGGAACTTCGACCTGGAATAATCGCAGTCGGGGGGTATCATCATAGTTTAAAACCTACATCTCAGGGTCTGTCCTTATGTGTAGACTACTCGGTGGTGCCTTTCCGAAAGCAAATGTCAGTCTTGGATTTCTTGCATGAGCGTATCGAAAACTTTAGCTTGGGTGAATTTGAAAATTTCAGGAAATATGTTGAGGAGGTGCTTATTGGATTGAAAGTTAGTGTGACTCACCGTAAATCCCAACAGAAATATAGCATTGTACGATTAACACCTACAGCTACAAGGTATGTCACTTTCCCCATAGACAATACTAAGGGATGGAAACTTGAAAAGGAAGTCAGTCTTCTTAGCTTTTTTAATGACAAATATGGTAAGGACATTGTATACAAAGATATTCCTTGTTTAGATTTAGGGAAAGGAAACAAGAAGAACTATGTACCCATGGAATTTTGTGTTGTAGCTGAGGGCCAAAGATATCCCAAGGAGCGTTTGGATGGTGTTTCTGCGAAGACATTGGAAGCAATGGCACTAGCTCACCCAAGCGAGAGGCAGGGTGCCATACAGAAGATGGTGCAATCGAGTGATGGACCTTGCGGTGGTGATCATATTCAGAATTTTGGAATGAGAGTCAGCACGACCATGACAACCATTCTAGGACGTGTAATTGGCCCCCCAGAATTGAAGTTGGGTGATCGAAATGGCAAGAATATCAAGATAACAGTGGATCTAGATAAATGTCATTGGAACCTTGCTGGAAGATCAATGGTGGAAGGCAAACCAGTTGAGCATTGGGCAATTCTTGATTTCACCAGTGTTGGGCCGTATAATAAGAAATTAAGACGAAAGGAATTCATTGAAAAACTTATTGGTAAATACAAAAGGTTGGGTATCTTTATGCAAGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTTCAAGTCATGACTTGCTATCTGAATTACTTGAAAAAGTCAACAACATTTGTAAAAATAGCCAAGGTGGTCTACAATTTCTTCTGTGTGTGATGGCTTATAAAAATCCAGGTTACAAATACCTCAAGTGGATTTCTGAAACCAAAGTTGGTATAGTGACTCAATGTTGTTTGTCTCCTAGTGCTAATCAAGGGGATGACAAATTCTATACTTATCTAGCTCTCAAGATCAATGCCAAGCTTGGAGGCAGTAATGTAGAGCTCAATAATAGGCTCCCTTACTTTGAGGGTGACGAACATGTTATGTTTATTGGGGCTGATGTCAATCACCCTGGTTTTCGGGACAACAAGAGTCCATCAATTGTTGCTGTGGTTGCAACCGTTAATTGGCCCGCTGCAAATCGTTATGCAGCTCGTGTTTGCCCTCAATGCAATCGAAGTGAGAAAATATTAAACTTCGGGGAGATTTGTGTTGAGCTTGTTGGTTGTTATTGGAGGGCGAATGGAGTCAGGCCAGAAAAAATTGTTGTTTTTCGTGATGGGGTGAGTGAGTACCAGTTTGACATGGTTCTTAATGAAGAGCTACTTGATTTGAAGAGAGCATTCCAAAGATTAAATTATTTCCCAACGATCACTCATATTGTAGCACAAAAACGACATCAAACTCGTTTTTTTCCAGACAGTTGGAGGGATGGGTCTTCCAGTGGCAATATTTTACCGGGAACTGTTATTGACACAAAAGTTACACACCCCTTTGAGTTTGACTTTTACCTTTGTAGTTACTATGGAAGCCTAGGTACAAGCAAGCCCACTCATTACCATGTTTTATGGGATGAACACAAGTTTACATCTGATGAATTGCAGAAACTTATATATGAAATGTGCTTCACATTTGCAAGGTGCACTAAACCTGTATCTTTAGTCCCTCCTGTGTATTATGCTGACCTTGCTGCTTATAGAGGACGGTTATACCACGAAGCAAAGATTGGGATGCAACCTAAGAAGTCAAAAGCATCTTCATCTTCTAAAGATTCATCTTCGGTTCCACCAACAGCTTCGTTTGAACAGGGATTTTACAGGTTGCATGCTGACCTGGAAAACATAATGTTCTTCATCTAA 3099 0.4121 MESGDGYGGRKETQQTSDEVILQPEWRRRTASTGRDQNLTLQPEWRRGRSTASPSPSGAGDEVQKKEEEQKKEILFQPEWRSSKVNASGVWEPEWRRSRSTATATAYPWNQNYGVRKSVGSSSGGVQRGRNIDESRRNAPALVDDAVPKLERLQISDNLATASSSLEKKDKTLPIRRPDNGGTLAVLTRTLRVNHFPVKFNPDSIIFHYNVNVKSKFSSKVGQPRKLSNADLSVIREKLFSDDPERFPLDMTAHDGAKNIFSAVQLPEETITVEISEGEDEKITLYSVTLTLLNKLRLCKLMDYLCGHSFSLPRDILQGMDVVIKENSNRCTISVGRYFYPTNPPLVMKELRPGIIAVGGYHHSLKPTSQGLSLCVDYSVVPFRKQMSVLDFLHERIENFSLGEFENFRKYVEEVLIGLKVSVTHRKSQQKYSIVRLTPTATRYVTFPIDNTKGWKLEKEVSLLSFFNDKYGKDIVYKDIPCLDLGKGNKKNYVPMEFCVVAEGQRYPKERLDGVSAKTLEAMALAHPSERQGAIQKMVQSSDGPCGGDHIQNFGMRVSTTMTTILGRVIGPPELKLGDRNGKNIKITVDLDKCHWNLAGRSMVEGKPVEHWAILDFTSVGPYNKKLRRKEFIEKLIGKYKRLGIFMQEPIWYEESSMKILSSHDLLSELLEKVNNICKNSQGGLQFLLCVMAYKNPGYKYLKWISETKVGIVTQCCLSPSANQGDDKFYTYLALKINAKLGGSNVELNNRLPYFEGDEHVMFIGADVNHPGFRDNKSPSIVAVVATVNWPAANRYAARVCPQCNRSEKILNFGEICVELVGCYWRANGVRPEKIVVFRDGVSEYQFDMVLNEELLDLKRAFQRLNYFPTITHIVAQKRHQTRFFPDSWRDGSSSGNILPGTVIDTKVTHPFEFDFYLCSYYGSLGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEAKIGMQPKKSKASSSSKDSSSVPPTASFEQGFYRLHADLENIMFFI* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2455 1032 MobiDBLite consensus disorder prediction 118 140 - -
Tpr7g2455 1032 Pfam Argonaute linker 1 domain 334 385 IPR014811 -
Tpr7g2455 1032 CDD PAZ_argonaute_like 387 502 - -
Tpr7g2455 1032 Gene3D - 756 1032 IPR036397 GO:0003676
Tpr7g2455 1032 MobiDBLite consensus disorder prediction 1 79 - -
Tpr7g2455 1032 Pfam PAZ domain 397 515 IPR003100 GO:0005515
Tpr7g2455 1032 SUPERFAMILY PAZ domain 382 541 IPR036085 GO:0005515
Tpr7g2455 1032 SUPERFAMILY Ribonuclease H-like 680 986 IPR012337 -
Tpr7g2455 1032 SMART Piwi_a_2 687 985 IPR003165 GO:0003676
Tpr7g2455 1032 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 67 1031 - -
Tpr7g2455 1032 ProSiteProfiles PAZ domain profile. 387 503 IPR003100 GO:0005515
Tpr7g2455 1032 MobiDBLite consensus disorder prediction 61 78 - -
Tpr7g2455 1032 CDD Piwi_ago-like 550 984 IPR045246 -
Tpr7g2455 1032 Gene3D - 569 750 - -
Tpr7g2455 1032 SMART PAZ_2_a_3 387 520 IPR003100 GO:0005515
Tpr7g2455 1032 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 67 1031 - -
Tpr7g2455 1032 ProSiteProfiles Piwi domain profile. 687 986 IPR003165 GO:0003676
Tpr7g2455 1032 SMART DUF1785_2 333 386 IPR014811 -
Tpr7g2455 1032 MobiDBLite consensus disorder prediction 33 58 - -
Tpr7g2455 1032 Gene3D paz domain 382 507 - -
Tpr7g2455 1032 Pfam Piwi domain 688 982 IPR003165 GO:0003676
Tpr7g2455 1032 Pfam N-terminal domain of argonaute 190 324 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2455 Tpr-Chr7 31775817 31782458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2455 191 1005 Eukaryotic Initiation Factors Gene Family AT1G48410 34.803 1.41e-141 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2455 K11593 - gmx:100783571 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2455 7 31775817 31782458 Tpr7g2455 7 31775817 31782458 ECH