Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2431 ATGGAGGATTCCGAAGGAGTCCTCAACTTCGATTTCGAAGGCGGACTCGACGCACAACAACCTCCCGCCGCCATCGCATCCGCCTCCGTTCCCGCCGCACCTTCCGGTCCTATTATCCAACCCGATTCATACTTACCACAACCTTCTAATGCTCCCAATGGTGCTACCAATGCTCCTTCCGTTACTGAACCGGTTTCTGGTAATGTTCCTGGAAGACGAAGCTTCCGGCAAACGGTTTGTCGTCACTGGCTTCGTAGTTTGTGTATGAAAGGTGAAGCGTGTGGATTCTTGCATCAGTATGATAAGGCTCGGATGCCGGTGTGTCGGTTTTTTCGATTGTATGGAGAGTGTCGTGAGCAAGATTGTGTTTATAAGCATACTAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCTAATGGGCCTGATTGTCGATACAGGCATGCAAAATCTCCTGGACCTCCGCCTCCGATTGAAGAGGTCCTTCAAAAGATCCAACATTTATATTCTTACAACTATAACAATTCTCACAAATTTATCCAACAAAGGGGTTCTAATTATAATACTCAACAAGCTGATAAGCCTCAGTTTCCTCAAGGAATTAATTCTGCAAACCAAGGTGCGGTTGCAAAACCATTAGCTTCAGAGTCTGGAAATGTCCAGCAGCAGCAACAAGTTCAACAACAGTCTCAGCCGCAGGTTAGCCAGAACCAAGTGCAAAATCTTGCTAATGGCCAACCCATTCAAGCCAATCGAACGTCAACCCCTTTACCTCAAGGAGTATCTAGGTATTTTATTGTTAAGAGTTGCAATCGTGAAAATTTGGAGTTATCTGTTCAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCAAAACTAAATGAAGCATTTGACTCTGTGGAAAATGTGATATTGGTTTTCTCAGTCAACCGTACTCGACACTTCCAGGGCTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTGCTGGGGGAAACTGGAAATATGCTCATGGAACGGCACATTATGGGCGGAATTTCTCTGTTAAATGGTTGAAGTTATGTGAACTTTCATTCCACAAAACACGCCATTTGAGAAATCCATACAATGAGAACTTACCAGTGAAGATAAGCAGAGATTGTCAGGAGCTGGAACCTTCAATCGGTGAGCAGTTGGCATCCTTGCTGTATACTGAGCCGGATAGCGAACTTATGGCTATCTCAATTGCAGCAGAGTCTAAACGAGAAGAAGAGAAAGCAAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGACATTGTCCCATTTGAAGACAACGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGATGAGAGCTTTGGTCAAGCTGTAGGACCAGCTGTCCAAGGAAGAGGTAGGGGAAGAGGAATGATGTGGCCTCCCCACATGCATATGGGGCGTGGAGCCAGACCCATGCATGGAATGCAAGGTTTTAACCCTGTAATGATGGGCGATGGATTATCCTACGGGCCTGGTGGGCCTGATGGTTTTGGTATGCCAGATCTTTTTGGCATGGGTCCCCGAGGTTTTGGTCCATATGGTCCTAGGTTCTCTGGTGATTTTGGAGGCCCCCCAGCTGCCATGATGTTCCGAGGACGACCCTCACAACCTGGGATGTTTCCAGGTGGTGGATTTGGGATGATGATGAATCCTGGACGCGGTCCCTTTATGGGGGGAATGGGGGTTCCAGGTCCGAACGGACCAAGAGGTGGTAGGCCAGTCAATATGCCTCCGATGTTTCCACCACCTCCGCCTCCACCACAAAATATGAACCGCCCTAAAAGAGATCAAAGAACAAGTGACCGGAATGATAGGTTCGGTTCAGGACCAGATCAAGGTAAGAGTCAAGACATGCTCAGTCAAAGTGGGGGTCCTGATGATGACATGCAGTATCAACAAGGATATAAGTCACAGCAGGATGAAAGGAACGACGATAGTGAAAGTGAAGATGAGGCACCTAGGCGGTCAAGACACGGAGAGGGAAAAAAACGAAAAGGCGAAGCTTAG 2067 0.4669 MEDSEGVLNFDFEGGLDAQQPPAAIASASVPAAPSGPIIQPDSYLPQPSNAPNGATNAPSVTEPVSGNVPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNYNNSHKFIQQRGSNYNTQQADKPQFPQGINSANQGAVAKPLASESGNVQQQQQVQQQSQPQVSQNQVQNLANGQPIQANRTSTPLPQGVSRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYTEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEDESFGQAVGPAVQGRGRGRGMMWPPHMHMGRGARPMHGMQGFNPVMMGDGLSYGPGGPDGFGMPDLFGMGPRGFGPYGPRFSGDFGGPPAAMMFRGRPSQPGMFPGGGFGMMMNPGRGPFMGGMGVPGPNGPRGGRPVNMPPMFPPPPPPPQNMNRPKRDQRTSDRNDRFGSGPDQGKSQDMLSQSGGPDDDMQYQQGYKSQQDERNDDSESEDEAPRRSRHGEGKKRKGEA* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2431 688 Gene3D - 70 131 - -
Tpr7g2431 688 MobiDBLite consensus disorder prediction 658 688 - -
Tpr7g2431 688 ProSiteProfiles YTH domain profile. 266 401 IPR007275 GO:0003723
Tpr7g2431 688 SMART c3hfinal6 102 128 IPR000571 GO:0046872
Tpr7g2431 688 SMART c3hfinal6 130 154 IPR000571 GO:0046872
Tpr7g2431 688 SMART c3hfinal6 74 100 IPR000571 GO:0046872
Tpr7g2431 688 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 685 IPR045168 -
Tpr7g2431 688 MobiDBLite consensus disorder prediction 418 474 - -
Tpr7g2431 688 SUPERFAMILY CCCH zinc finger 74 105 IPR036855 GO:0046872
Tpr7g2431 688 MobiDBLite consensus disorder prediction 213 243 - -
Tpr7g2431 688 MobiDBLite consensus disorder prediction 629 657 - -
Tpr7g2431 688 Pfam YT521-B-like domain 345 400 IPR007275 GO:0003723
Tpr7g2431 688 Pfam YT521-B-like domain 266 328 IPR007275 GO:0003723
Tpr7g2431 688 Gene3D ph1033 like domains 228 406 - -
Tpr7g2431 688 MobiDBLite consensus disorder prediction 614 628 - -
Tpr7g2431 688 ProSiteProfiles Zinc finger C3H1-type profile. 74 101 IPR000571 GO:0046872
Tpr7g2431 688 MobiDBLite consensus disorder prediction 601 688 - -
Tpr7g2431 688 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 1 685 - -
Tpr7g2431 688 MobiDBLite consensus disorder prediction 440 459 - -
Tpr7g2431 688 ProSiteProfiles Zinc finger C3H1-type profile. 128 155 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr7g2431 YTH 1.3e-44 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2431 K14404 - gmx:100802826 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2431 7 31492418 31502091 Tpr7g2431 7 31492418 31502091 ECH