Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2419 ATGGTTCCAAGGAATTTTGTTGAGAGATATTGGAAAGATGTATCAAATCCAATTTCCCTTAGACTTCCAAATGAGTCTGTTTGTAAAATGTTTTGGGTGCAATTTGGTGACGAGATTTGGCTTCAGGATTGGAAAAGGTTTGCACGGTCGCTTAGATGCGGAGATCTTAAAGTTTTTCAATACAAAGGAGGATCAGATTTTCATGTCATTATACTTGATGATAGTAAACTAGAAATTGACTATTCAAGTATGATTTGCAACGATAAACAAGAAGCTAAAGAGAGTGATGATGATGGCTATGTTGAGATTACAAATGAGGCTGATAATGCCAAACAATCCCTCAAGAAAAAGAAAATCAACTCAAATGATAGTGATACCACTACTGCTACAACTCAAGTGACAAACATTGTCAATAGAAAAATTAATACAAAGGCAACCCAGCAAAAAGTCTTAGAGGCTAATGGAACCAGAGGAGGCAGCGGTAAGAAAGCTAAGAAATGCTCAAAAACTGTAGATGCAAATAAGAGAAGCTGCACTGATGCTCTTGGATTTTTAAACCTTGTTGAAGGAGAAAAACAAATTCAAACCTGGATGTTTTCAAGAAGGAGAAAGACAAATTCAAACCTGGATCTAAGGTAG 639 0.3615 MVPRNFVERYWKDVSNPISLRLPNESVCKMFWVQFGDEIWLQDWKRFARSLRCGDLKVFQYKGGSDFHVIILDDSKLEIDYSSMICNDKQEAKESDDDGYVEITNEADNAKQSLKKKKINSNDSDTTTATTQVTNIVNRKINTKATQQKVLEANGTRGGSGKKAKKCSKTVDANKRSCTDALGFLNLVEGEKQIQTWMFSRRRKTNSNLDLR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2419 212 Gene3D - 1 76 IPR015300 -
Tpr7g2419 212 PANTHER B3 DOMAIN-CONTAINING 1 176 - -
Tpr7g2419 212 SUPERFAMILY DNA-binding pseudobarrel domain 1 73 IPR015300 -
Tpr7g2419 212 Coils Coil 100 120 - -
Tpr7g2419 212 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2419 Tpr-Chr7 31206784 31209931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2419 2 83 B3 DNA Binding Superfamily AT3G18990 35.294 5.03e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2419 - - mtr:MTR_6g061070 231.876