Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2406 ATGGCACTTTCTATGCACAAAGATATGAATAATCAAATGGATGCTGGAAAATATGTGAGGTATACACCTGAACAAGTTGAAGCTTTGGAAAGAGTTTATTCAGAATGTCCTAAGCCTAGTTCTTTGAGAAGACAACAACTTATAAGGGAATGTCCTATTCTTTCTAACATTGAACCTAAACAGATCAAAGTTTGGTTTCAAAATCGAAGGTGTCGTGAGAAGCAAAGAAAGGAAGCATCTCGTTTGCAGACAGTGAACAGAAAGCTATCTGCAATGAATAAGTTGTTAATGGAAGAAAATGACCGTTTGCAGAAGCAAGTTTCTCATCTGGTGTATGAGAATGGATACATGAAGCAACAGATTCACACTGTGAGTGCTTCTGCTGCAACTACCACAGATAATAGCTGTGATTCTGTGGTAATGAGTGGTCAAAATCAACAGCAAAACCCAAATCAGCGTCCTCAAAGGGATGCAAGCAACCCAGCTGGTCTTCTCGCGGTTGCTGAGGAGACCCTGGCAGAGTTCCTTTCTAAGGCTACCGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGTATCGTTGCTGTTTCTCGCAATTGTAGTGGGATAGCGGCACGTGCCTGCGGCCTTGTGAGTCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATCGTCTGTCATGGTACCGTGACTGCCGATGTGTTGAAGTGTTGAGTATTGTCCCTACTGGTGGTGGTGGTACAATAGAGCTTATGTACATGCAGACTTATGCGCCTACAACATTGGCCGCAGCACGAGACTTTTGGACACTGAGATACACTACTAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGAATGCTTCAACTGGTGGTCCTCCAGGGCCTTCTTCGCCGAATTTCGTGAGAGCTGAAATGCTTCCAAGTGGATTTCTAATTCGACCATGTGAGGGCGGTGGATCCATTATTCATATTGTTGATCATGTTGATTTAGATGTTTGGAGTGTCCCTGAAGTACTAAGGCCCCTTTATGAATCGTCAAAAATCTTGGCTCAAAAATTGACTATTGCAGCATTGCAACACATAAGACAGATAGCACAAGAATCAAGTGGTGAAATTCAGTACGGTGGCGGGCGCCAACCTGCTGTTTTGAGAACTTTTAGTCAGAGGCTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTTGATGATGGTTGGTCATTGCTGGGAAATGATGGAGTGGAAGATGTGACAATAGCTGTGAACTCTTCTCCGAATAAGTTTTTAGGGTCGAATTACTCAACAATGTTCCCAACATTTGGAGGTGGTGTCTTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTACTTGTTCGATTTTTGAGGGAGCATCGATCCGAGTGGGCTGATTATGGTGTAGATGCATACTCTGCTGCTAGTCTCAAGGCTAGCCCCTATGCAGTTCCGTGTGCAAGACCTGGTGGCTTCCCCAGCAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCATGAGGAGTTCCTGGAGGTAGTTCGTATAGAAGGTCATGCATTTTCCCCGGAAGATGTTGCGTTGGCACGTGATATGTATCTTTTGCAGCTCTGCAGTGGAATTGATGAAAGTTCAGTTGGAGCGTGTGCTCAACTTGTGTTTGCACCTATCGACGAATCCTTTGCGGATGACGCCCTTTTGTTGCCTTCTGGTTTTCGTGTTATTCCCTTGGATCCCAAACCAGACGGTTCAGCTTCAAGGACATTGGATTTGACATCAACACTAGGATCTAGTAATGCTCGTGCAGCTGGTGATGGCGAAGCAAGTGGATACAACCTTAGGTCGGTTCTTACGATCGCATTTCAATTTACCTTTGAGAATCATTTGCGCGACAACGTGGCTGCTATGGCTCGTCAGTATGTGCGTAGTGTTGTTGGATCGGTTCAGAGGGTTGCCATGGTAATTGCTCCCGCACGACCAGGTTCTCAGCTAGGGCCAAAATCACACCCCGGTTCTCCAGAAGCTCATGCTTTAGCACGATGGATCAGTAGAAGCTACAGGATACACACTGGTGCTGATCTTTTCAGAGTTGAGCCCGCAGCTAGCGGCGATGCAATCTTGAAGCAACTTTGGCAACATTCTGATGCAATTATGTGCTGTTCCGTAAAAACAAATTCATCTCCGATATTCACCTTTTCAAACCAAGCTGGACTCGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATAATGCTTGATAAAGTTCTTGATGAAGCTGGTAGAAAGATCCTTTGCTCTGAATTCTCTAAGATAATGCAACAGGGTTATGCATATCTGCCAGCAGGATTATGTGTCTCAAGCATGAATAGGCCAGTGTCTTATGAGCAAGCTATTGCTTGGAAAGTTCTCAATGATGATGATGCCAATCACTGCATAGCTTTCATGTTCATCAACTGGTCCTTTGTCTGA 2532 0.4502 MALSMHKDMNNQMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTVSASAATTTDNSCDSVVMSGQNQQQNPNQRPQRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVEVLSIVPTGGGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNASTGGPPGPSSPNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSTMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGIDESSVGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKPDGSASRTLDLTSTLGSSNARAAGDGEASGYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVGSVQRVAMVIAPARPGSQLGPKSHPGSPEAHALARWISRSYRIHTGADLFRVEPAASGDAILKQLWQHSDAIMCCSVKTNSSPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYAYLPAGLCVSSMNRPVSYEQAIAWKVLNDDDANHCIAFMFINWSFV* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2406 843 Gene3D - 9 83 - -
Tpr7g2406 843 MobiDBLite consensus disorder prediction 139 159 - -
Tpr7g2406 843 SUPERFAMILY Bet v1-like 167 378 - -
Tpr7g2406 843 SMART HOX_1 14 80 IPR001356 GO:0003677
Tpr7g2406 843 Gene3D - 192 378 IPR023393 -
Tpr7g2406 843 SUPERFAMILY Bet v1-like 414 600 - -
Tpr7g2406 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 843 - -
Tpr7g2406 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 843 IPR044830 GO:0003700
Tpr7g2406 843 SUPERFAMILY Homeodomain-like 17 79 IPR009057 -
Tpr7g2406 843 Coils Coil 82 106 - -
Tpr7g2406 843 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Tpr7g2406 843 SMART START_1 166 376 IPR002913 GO:0008289
Tpr7g2406 843 MobiDBLite consensus disorder prediction 139 158 - -
Tpr7g2406 843 CDD bZIP 69 108 - -
Tpr7g2406 843 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Tpr7g2406 843 CDD homeodomain 17 77 IPR001356 GO:0003677
Tpr7g2406 843 Pfam START domain 167 374 IPR002913 GO:0008289
Tpr7g2406 843 ProSiteProfiles START domain profile. 157 358 IPR002913 GO:0008289
Tpr7g2406 843 Pfam MEKHLA domain 697 842 IPR013978 -
Tpr7g2406 843 CDD START_ArGLABRA2_like 161 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2406 Tpr-Chr7 31059219 31064680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2406 1 843 Homeobox Transcription Factor Family AT2G34710 78.129 0.0 1380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr7g2406 START 2e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2406 K09338 - gmx:100807428 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2406 7 31059219 31064680 Tpr7g2406 7 31059219 31064680 ECH