Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2401 ATGGCTCATATTTGTCAATGTCTCAGTCGACTGTTAACTTTCCGGCGACACTTTCCGGTAACCGTTGCCGGAAACCACCATAAGACAGGGGAACAATTTGTGGAGAAGGTGGTTTCACTAGCACATGGTCTTGTACAACTTGGAGTCACACCTGGTGATGTTGTAGCCATCTCTGCTTACAACAGTGATTGGTATCTTGAATGGTTATTAGCCATTGCATTTGTTGGAGGAATTGCTGCTCCTTTGAACTATCGTTGGAGTTTTGAAGAGGCAAGGTTAGCAATGAAAGCAGTGAAACCAGTGATGTTAGTGATTGATGAGAGCTGTTATCCATGGTACTTCAAATTCCAACAAAATGATATTCCATCTCTAAAGTGGCATGTTTTGTTGGATTCCCCTTCTTCAGATTTTACAAACAAATCGAATGTGTTGACTCAAGGAATACTTATGAAGCATCTTGTAAAGCCTTTAGAGTTGGAATACTCGTCGGCACCTGAAGGAGCTGTTATAATATGCTTTACTTCAGGAACTACCGGAAAACCCAAGGGAGTGACAATAAGCCATGAAGCTTTGATCATACAGTCCCTAGCAAAGATTGCCATAGTTGGATATAGCGAAGATGATGTCTATCTTCATACTGCGCCATTGTGTCACATTGGTGGCTTGTCATCAGCCATGGCCATGCTTATGGTTGGAGGTTGCCATGTATTCATGCCGAAGTTTGATGCAAAATTAGCCGTTGGTGCCATAGAACAATATGCTGTGACATCTTTTATCACAGTTCCTGCAATGATTACCAGTCTTAATTCTAATATTAGGCACCATGAAACCTGGAAGGGGGGAGAAACTGTCATGAAAATACTCAATGGTGGTGGAAGCCTCTCACATGAGCTTATTAAAGACACTAACATATTCTTCCATAAAGCTAAGCTTATTTCAGCTTATGGGATGACAGAAGCATGCTCTTCACTGACATTCTTGACGCTGTATGATCCAACGCAAAAAACCACTAGCCATCCTTTTCGAACAAATGGCGAGGTAGAATCCGAATATCTCATTGATCAGCCACATGGTGTTTGTGTTGGCAAGGCTGCACCTCATGTAGAACTGAAGATATGCACAGATTCCTCTAGCGACAATGGGAGAATTTTAACTAGAGGACCACATTTAATGCTCAGGTATTGGGATCAAACTATCGAAAACTCGTCAAGTCAGAAGAATGAAGTATGGCTTGACACTGGTGACATTGGATCAATGGACTGTCATGGTAATTTGTGGCTCCTTGGACGTACAAATGGTCGAATCAAGAGTGGTGGAGAGAATATTTACCCTGAAGAGGTTGAGGCAATTCTACTAGAACATCCAGGGATTGCAAATGTTGTGATTGTGGGAATCCCAGATGTGCGTTTCACAGAGACGGTAGCAGCATGTATCCAACCACGAGAAAATTGGCAATGGTTAGAGCACTCTACTTCAAATGAAGACAATCACTTATCTAGAAAGAATCTTCAACAATACTGTCTACAAAATAATTTAAGCAGGTTTAAGATACCGAAGATATTTAGAGAATGGAGGAAGCCTTTTCCAGTCACAACCACAGGAAAAATAAGAAGAGATCAAGTCAGAAAGGAGCTTATATCTGAGCTACAAATTTTGCATAGTAATCTTTGA 1671 0.4117 MAHICQCLSRLLTFRRHFPVTVAGNHHKTGEQFVEKVVSLAHGLVQLGVTPGDVVAISAYNSDWYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMKAVKPVMLVIDESCYPWYFKFQQNDIPSLKWHVLLDSPSSDFTNKSNVLTQGILMKHLVKPLELEYSSAPEGAVIICFTSGTTGKPKGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVFMPKFDAKLAVGAIEQYAVTSFITVPAMITSLNSNIRHHETWKGGETVMKILNGGGSLSHELIKDTNIFFHKAKLISAYGMTEACSSLTFLTLYDPTQKTTSHPFRTNGEVESEYLIDQPHGVCVGKAAPHVELKICTDSSSDNGRILTRGPHLMLRYWDQTIENSSSQKNEVWLDTGDIGSMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIANVVIVGIPDVRFTETVAACIQPRENWQWLEHSTSNEDNHLSRKNLQQYCLQNNLSRFKIPKIFREWRKPFPVTTTGKIRRDQVRKELISELQILHSNL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2401 556 Gene3D - 6 432 IPR042099 -
Tpr7g2401 556 CDD AFD_class_I 171 537 - -
Tpr7g2401 556 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Tpr7g2401 556 PANTHER ACYL-COA SYNTHETASE 3 545 - -
Tpr7g2401 556 Pfam AMP-binding enzyme 22 437 IPR000873 -
Tpr7g2401 556 Gene3D - 433 548 IPR045851 -
Tpr7g2401 556 SUPERFAMILY Acetyl-CoA synthetase-like 4 547 - -
Tpr7g2401 556 Pfam AMP-binding enzyme C-terminal domain 446 535 IPR025110 -
Tpr7g2401 556 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 3 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2401 Tpr-Chr7 31004415 31008325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2401 40 464 Monolignol Biosynthesis Gene Families AT3G21240 29.062 1.45e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2401 K14760 - gmx:100809925 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2401 7 31004415 31008325 Tpr7g2401 7 31004415 31008325 ECH