Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2376 ATGAAACGCATTTGCGGGTCCCGTGATGATGACATTAATAACGACGAAAGAAGATCTCCTTACAACCGTCTTACGACGGCGCAAACAGCTAGACTTGAAAATTTCATGAAAGAATGCAATCATCCAAATGAGACCCAACAACAACAATTGGCTGAGGAGCTTGGGCTTCAGCCCAAACAAGTTAAATATTGGTTCCAGAATAAAAGAACTTTGTTGAAGAACCAACACGAGAAACAACATAACAATAATCTTCGTTTGGAGAACGAAAGACTTCGTAATGAAAACCTCCTAATGAAAGAGGCACTGAAGGCCACAAAGTGTGAACCTTGTGGGGGTCCCCCATTTCCGATGGAAGAACATCAACATTACATGCACAAGATGCAACAAGAAAATGCTGAGCTTAAAAAAGAGGTTTCTAAAAGTTTCATGGAGAGCAATGAACTTGACAATCCACCAATGGTTTATCAAACATCAAGTCATCTTCATCGTCTTAGTAATCTAACTATGAGGGAAGATATGTCGGTGAATAGATCAACACAATGTTATGATGAAGAAAAGACAATGATGCTGCAAATTGCAACTCTTGCTATGCAAGAATTGGAAAGGCTTGTAAGGGTTAACGAGCCTTTCTGGATCAACTTTTCAAATACTCATCAAGATGAGAGATACACTCTTGATCATGAAAGGTATTGTCAATTTTTTCCCAAGAACAATCACATTAGAGGTGATAATGTTTATAAGGAATCTTCAAAGTATTCAGGAATAATTGGACTTGATGGCATGAAATTGGTTGATATGTTTCTTGACTCGGACAAATGGAGAAACTTGTTCCCAACAATTGTTACTAAAGCGGAAACTACCAAAGTTCTTGAAATCGGTTTGCCTGGAAATCGAGATGGAGCTTTGTTGTTGATGAATGAAGAAATGCATATTTTATCACCTCTAGTGCGGCCTCGTGAATTTAACATAATTCGCTATTGCAAACAAGTTGATGTTGATGTATGGGTGATAACCGACGTGTCATTTCATTCTTCTAGACCAAACACACCACCTCTGTCTCACTCTTGGAAACATCCTTCTGGATGTATAATTCGTGAAATGCCTAACAAGTCATGTTTGGTTACTTGGGTTGAGCATGTGGAAGTGGAAGATATGCTTCATACACACCACATTTTTAGAGATTTTGTGGTTAACAATACTTTATATGGAGCTGAAAGCTGGATCAAGGAGCTTCAAAGAATGTGTGAGAGATTTTTTAGTTTTTATGCTGAAACTGTACCGGCTGGAGAATCTATAGGAGTGATCCAAACAATTGAAGGGAGGAGGAGTGTGATGAAGCTTGCTGATAGAATGGTTAAGATTTTTTGTGAATGTTTAAGAATGGCTGGTCAATTAGAATTCCAACATTTGAATCTTGAAAGTAGCATTGGTGGGGTTAGAGTTTCTCTTCGCCAAGCCACTGACATAGGCCAAGGCATAGTTGTTGCTGCTGCTACCACCCTTTGTCTCCCTCTGCCTGCTGAATATGTTTTTGATTTCCTCAAAGACCCTACAAAAAGATATCAGTGGGATGTTATGGCTTATGAAAATCCAATGTATGAGATTGGCCACGTTTCAAATGGACTCAATCCTGGCAACTACACTACAATTTTTCAGCCATACAACCCTAGTGAGAACTCCACCATGATTTTACAAGAAAGTTTTACATCTCCTGTGGGATCATATGTTATATATGCTCCAATAGATATAATATCTATGAATGCAGTCATATGTGGTGAAGACTCAACAAAGCTACCAATTATTCCCACTGGATTTGTTGTGTGTCCATATGCACAACCAAATGCAACTTTTGAAGCATCTAACAATATTGGAACTAACACATTGTTAACTTTGGCCTATCAAATTTTGACATGTAATCCAAATGGAATTGATCAACACCAAAACATGGAAGCTTTTGCTACTATGAACACCCTTCTGACCACTAGTGTTCTAAAAGTAAGGGGTGCTCTCATGAACTCTTATTAA 2025 0.3837 MKRICGSRDDDINNDERRSPYNRLTTAQTARLENFMKECNHPNETQQQQLAEELGLQPKQVKYWFQNKRTLLKNQHEKQHNNNLRLENERLRNENLLMKEALKATKCEPCGGPPFPMEEHQHYMHKMQQENAELKKEVSKSFMESNELDNPPMVYQTSSHLHRLSNLTMREDMSVNRSTQCYDEEKTMMLQIATLAMQELERLVRVNEPFWINFSNTHQDERYTLDHERYCQFFPKNNHIRGDNVYKESSKYSGIIGLDGMKLVDMFLDSDKWRNLFPTIVTKAETTKVLEIGLPGNRDGALLLMNEEMHILSPLVRPREFNIIRYCKQVDVDVWVITDVSFHSSRPNTPPLSHSWKHPSGCIIREMPNKSCLVTWVEHVEVEDMLHTHHIFRDFVVNNTLYGAESWIKELQRMCERFFSFYAETVPAGESIGVIQTIEGRRSVMKLADRMVKIFCECLRMAGQLEFQHLNLESSIGGVRVSLRQATDIGQGIVVAAATTLCLPLPAEYVFDFLKDPTKRYQWDVMAYENPMYEIGHVSNGLNPGNYTTIFQPYNPSENSTMILQESFTSPVGSYVIYAPIDIISMNAVICGEDSTKLPIIPTGFVVCPYAQPNATFEASNNIGTNTLLTLAYQILTCNPNGIDQHQNMEAFATMNTLLTTSVLKVRGALMNSY* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2376 674 Pfam START domain 194 417 IPR002913 GO:0008289
Tpr7g2376 674 Coils Coil 117 144 - -
Tpr7g2376 674 CDD homeodomain 18 76 IPR001356 GO:0003677
Tpr7g2376 674 Gene3D - 191 417 IPR023393 -
Tpr7g2376 674 CDD START_ArGLABRA2_like 186 416 - -
Tpr7g2376 674 Gene3D - 3 91 - -
Tpr7g2376 674 SMART HOX_1 17 79 IPR001356 GO:0003677
Tpr7g2376 674 Pfam Homeodomain 19 73 IPR001356 GO:0003677
Tpr7g2376 674 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 13 671 - -
Tpr7g2376 674 SUPERFAMILY Bet v1-like 440 615 - -
Tpr7g2376 674 Coils Coil 69 108 - -
Tpr7g2376 674 SUPERFAMILY Homeodomain-like 11 82 IPR009057 -
Tpr7g2376 674 ProSiteProfiles START domain profile. 182 420 IPR002913 GO:0008289
Tpr7g2376 674 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
Tpr7g2376 674 SUPERFAMILY Bet v1-like 183 418 - -
Tpr7g2376 674 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 13 671 IPR042160 -
Tpr7g2376 674 SMART START_1 191 417 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2376 Tpr-Chr7 30757031 30762530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2376 15 670 Homeobox Transcription Factor Family AT1G73360 36.222 4.53e-148 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr7g2376 START 4.3e-28 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2376 K09338 - gmx:100795075 643.654