Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2315 ATGGCGAGGAAATACGAAGGACTTGGTGTTGGAATAGACCTTGGCACCACATACTCGTGTGTTGCAGTGTGGCAGGAACAACATTCTCGAGTTGAGATCATTCACAACGATCAAGGAAACAGAACAACTCCTTCTTTTGTTGCTTTTACTGAAGAACAAAGGTTGGTTGGTGATGCTGCTAAGAATCAAGCTGCTGCTAACCCTCAAAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTTTAGTGATCAAGTTGTTAGAGATGATATTCTATTGTGGCCATTCAAGGTTGTTGCTGGTATCAATGACAAACCCATGATTACTGTTAATTACAAGAATCAGGAGAAGCAGCTCTGTGCCGAAGAAGTATCATCTATGATACTCACAAAGATGCGAGAAATTTCTGAGATGTACTTGGGATCACCGGTTAAAAATGCAGTTGTTACTGTGCCTGCTTATTTCAGTGATTCTCAACGAAAGGCCACCATAGATGCTGGTGCTATTGCTGGCCTCAATGTCATGAGGATAATGAATGAACCCACCGCTGCAGCTGTTGCATATGGCCTTGACAAGATAACTAATTGTGTTGGAGAACGTAATATTTTTGTCTTTGATCTTGGTGGTGGAACTTTTGATGTGTCACTCCTAACAATTAAGGATAATGTATTCCAAGTTAAGGCCACTGCTGGAAACACTCACCTTGGTGGAGAGGACTTTGATAACAGAATGGTGAACTACTTTGTACAAGAGTTCAAGAGAAAGAAGAAATTAGATATTAGCGGGAATCCAAGAGCTTTGAGGAGGTTGAGAACTGCTTGCGAGAAGGCCAAAAGAACACTTTCTTTTCTTGTTGTCGCCGCTATTGAGGTGGATTCTTTATTCCAAGGCATTGACTTTTCTTCGTCAATTAATAGGGCCAAGTTTGAGGAAATGAATATGGACCTTTTCAATGAATGTGCGAAGATTGTTGAAAGTTGTCTTAATGATGCTAAGATGGACAAGAGTAAGGTAAATGATGTTGTTCTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGCAGCAGCTGTTGCAGGAGTTTTTCAAGGGGAAGGAGTTGTGCAAGAGCATTAACCCTGATGAGGCTGTAGCTTATGGGGCAGCTGTTCAGGCTGCTTTGTTGTGTGATGACATTAAGAATGTTCCTAAGTTGGTGCTGCAGGATGTTACACCTTTGTCTCTTGGTAGGTCTGTACTAGGAGATATCATGAGTGTGGTGATTCCTCGAAACACTTGCATTCCTGTCAAGAAGACAAGACCATATGTTACAATCGAAGATAACCAATCCAGTTCCATGATTGAGGTTTTTGAGGGTGAGAGAACAAGAGCTAGTGACAACAATTTGCTTGGTTCATTTATTCTTTCTGGTCATACCCTGGCTCCTCGTGGCCATCCTTTGGATGTCTGTTTTGCTATAGATGAAAATGGTATTTTGACAGTTTCTGCTAAGGAAAAGTGCAGTGGCAAAATGAATGAAATTACAATATCCAATCACAAAGAAAGGATGTCAGCTGAAGAAATTAAAAAATTGATTAAAGAAGCCGAGAGTTACCATGCTGAGGACATGAAATTCCTAAGGAAGGCTGAAGCAGTGAATGCATTGGATGACTACATTTACAAAATGAGAAGTGCTTTAAAGAAGAATATTAATTTAAGGCTCTCCTCAGAAGAAATCAAGAAGATCGAAGATGCAATTAAGGTGGCCACAGGTTTGGTTGATGAGAATGAGAATCACCATTACAATGACATAGATGTTCTCGAGAATCATTTGAAGGAGCTCAAAAATATGTTCGGACACATCATAGCTAAGACTGGTTAG 1860 0.4048 MARKYEGLGVGIDLGTTYSCVAVWQEQHSRVEIIHNDQGNRTTPSFVAFTEEQRLVGDAAKNQAAANPQNTVFDAKRLIGRKFSDQVVRDDILLWPFKVVAGINDKPMITVNYKNQEKQLCAEEVSSMILTKMREISEMYLGSPVKNAVVTVPAYFSDSQRKATIDAGAIAGLNVMRIMNEPTAAAVAYGLDKITNCVGERNIFVFDLGGGTFDVSLLTIKDNVFQVKATAGNTHLGGEDFDNRMVNYFVQEFKRKKKLDISGNPRALRRLRTACEKAKRTLSFLVVAAIEVDSLFQGIDFSSSINRAKFEEMNMDLFNECAKIVESCLNDAKMDKSKVNDVVLVGGSSRIPKVQQLLQEFFKGKELCKSINPDEAVAYGAAVQAALLCDDIKNVPKLVLQDVTPLSLGRSVLGDIMSVVIPRNTCIPVKKTRPYVTIEDNQSSSMIEVFEGERTRASDNNLLGSFILSGHTLAPRGHPLDVCFAIDENGILTVSAKEKCSGKMNEITISNHKERMSAEEIKKLIKEAESYHAEDMKFLRKAEAVNALDDYIYKMRSALKKNINLRLSSEEIKKIEDAIKVATGLVDENENHHYNDIDVLENHLKELKNMFGHIIAKTG* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2315 619 SUPERFAMILY Actin-like ATPase domain 10 193 IPR043129 -
Tpr7g2315 619 Gene3D - 73 128 - -
Tpr7g2315 619 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Tpr7g2315 619 PANTHER HEAT SHOCK PROTEIN 70KDA 4 617 IPR013126 GO:0005524|GO:0140662
Tpr7g2315 619 Gene3D - 194 368 - -
Tpr7g2315 619 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 617 - -
Tpr7g2315 619 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 549 IPR029047 -
Tpr7g2315 619 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 38 50 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 60 68 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 148 168 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 211 221 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 339 355 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 371 391 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 397 416 - -
Tpr7g2315 619 PRINTS 70kDa heat shock protein signature 477 493 - -
Tpr7g2315 619 Gene3D Actin; Chain A, domain 4 237 320 - -
Tpr7g2315 619 Gene3D - 10 386 - -
Tpr7g2315 619 Gene3D - 546 618 IPR029048 -
Tpr7g2315 619 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr7g2315 619 Pfam Hsp70 protein 10 611 IPR013126 GO:0005524|GO:0140662
Tpr7g2315 619 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Tpr7g2315 619 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 518 617 IPR029048 -
Tpr7g2315 619 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 545 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2315 Tpr-Chr7 30101505 30104358 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2315 1 617 Calmodulin-binding Proteins AT3G12580 65.161 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2315 K03283 - gmx:102667578 882.863