Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2311 ATGGATCGAGGCGACCAAATGGCTGCATTATCGGGTTCTGCATCGTACTTTATGCAGAGAGGATTACCTGGTTCTGGAAACCAACATGAATTGCATAGTCCGCCCGGTATTCGTCAACTACCGAATACCAATTCACCATTTCAATCAAGTATTGGTGGTACTATTGGATCCACATTGCCGATGGATTCTTCCGGAATTTCATCCCAATGTATCAATGTCGGTGCTCCTTCTGCGGCTGCTTCAACTGGTGAACCTGTCAAAAGGAAGCGAGGAAGGCCTAGAAAGTATGGGGCTGACGGAAATGTTTCGTTGGCGTTGACTCCAACAACACCAGCAAGTCAACCTGGATCTGTACCGCAAGTACAGAAACGTGGTCGCGGTCGCCCTCCAGGTTCAGGGAAGAAGCAGCAGTTGGCTTCTGTTGCTGGGTTGATCTCAAGTTCAGCTGGGAATGGTTTCACCCCACATGTGATCAATGTCGCAATTGGAGAGGACATTGCGACAAAAATTCTGGCATTTTCTCAGGAGGGACCTAGAGCTATATTTGTTATGTCAGCCACTGGTGCTGTCTCTACTGTGACGCTTTGTCAAGCTTCGACATCTGGGGGATCTGTCACATATGAGGGGCGTTTCGAGATACTTAGCTTGTCAGGCTCTTACTTGGTTGCTGATAATGGTAGCTCCCGAAATCGAACTGGTTCATTAAGTGTTTGTCTTGCAAGTCCTGATGGCCGTGTCATTGGTGGAGGCGTCGGTGGACTACTCATTGCTGCAAGTTCTGTTCAGGTGATACTTGGGAGCTTTATGTGGGGCGGACAAAAGACAAAGAAACAGAAGATTGAAGATTCGGAAGGTCAAGAAGTTGGTATAGAGGCAGATCATCATCAGCATCATCAGCATGGAGTTCATAATCCAGTTGCAATGAACAACATTTCTTCACCAAATCAAAATCTTACTCCATCATCTCTCAATTCTTGGCCTGCATCGCGTTCCTTGGATATGCGTAATTCGCATATTGACATTGATTTAATGCGCGGGTGA 1041 0.4678 MDRGDQMAALSGSASYFMQRGLPGSGNQHELHSPPGIRQLPNTNSPFQSSIGGTIGSTLPMDSSGISSQCINVGAPSAAASTGEPVKRKRGRPRKYGADGNVSLALTPTTPASQPGSVPQVQKRGRGRPPGSGKKQQLASVAGLISSSAGNGFTPHVINVAIGEDIATKILAFSQEGPRAIFVMSATGAVSTVTLCQASTSGGSVTYEGRFEILSLSGSYLVADNGSSRNRTGSLSVCLASPDGRVIGGGVGGLLIAASSVQVILGSFMWGGQKTKKQKIEDSEGQEVGIEADHHQHHQHGVHNPVAMNNISSPNQNLTPSSLNSWPASRSLDMRNSHIDIDLMRG* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2311 346 ProSiteProfiles PPC domain profile profile. 150 289 IPR005175 -
Tpr7g2311 346 CDD DUF296 154 245 IPR005175 -
Tpr7g2311 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 268 IPR005175 -
Tpr7g2311 346 Gene3D - 155 299 - -
Tpr7g2311 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 320 IPR039605 GO:0003680
Tpr7g2311 346 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Tpr7g2311 346 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Tpr7g2311 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 270 - -
Tpr7g2311 346 MobiDBLite consensus disorder prediction 103 120 - -
Tpr7g2311 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 320 - -
Tpr7g2311 346 MobiDBLite consensus disorder prediction 75 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2311 Tpr-Chr7 30061194 30066779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2311 1 346 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 49.311 6.47e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2311 - - gmx:100799791 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2311 7 30061194 30066779 Tpr7g2311 7 30061194 30066779 ECH