Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2300 ATGGGAAGGACACCATGTTGTGACAAAATGGGGTTGAAGAAAGGTCCATGGACAACTGAAGAAGATGAAATTCTTGTTAATTTTATCAAGAAAAATGGTGGTCATGGTAGTTGGCGTTCTCTTCCTAAGTTAGCAGGCCTTCGGCGTTGCGGCAAGAGTTGCCGGCTAAGATGGACGAACTACCTGAGACCTGATATTAAACGCGGTCCCTTTACACCTCAGGAAGAAAAACTAGTCATACAGCTACATGCCATCCTTGGAAATAGATGGGCTGCAATAGCTTCTCAGCTAGCAGGAAGAACAGACAATGAGATCAAGAATTTATGGAACACACACTTGAAGAAACGTCTCGTATGCATGGGAATTGATCCACAAACTCATGAACCAATAGCCTCATCACATTACTATCCACTTTCCAAATCACATTCATCTATCGCCACGCGCCACATGGCTCAATGGGAAAGTGCAAGACTTGAAGCAGAAGCAAGGCTCTCAAAAGACTCATCTTTATTCAACAATAACAACATTCCTTCTTTTGCAAGTAACAAAACTGATTCTGATTCTGACTATTTCCTTAAGATATGGAACTCTGAAGTTGGACAATCTTTTCGCTCCGTTCGTAAATCAGATGACGGCGACGACGATGATGATAAAACTAGGTGCATAAGTTCCATGTCTCAAGAAGGGTCATCTTGTAATAACACAAAATGTGGATCAGTTTCTGCTATTACTACTATAACAGATTTGGCTTCATCAACTCTTGCAAGCAATGTGAAGGAAGATTTTGAATGGAGAAACTACAAGTCATTTGATATTGGTTGTGATGATTCATCAAGCTCTAATGATCTTGAAGACTCATCTGACACTGCATTGCAGCTCTTGTTGGATTTTCCTTCTAACAATGACATGAGCTTCTTAGAATAA 924 0.4048 MGRTPCCDKMGLKKGPWTTEEDEILVNFIKKNGGHGSWRSLPKLAGLRRCGKSCRLRWTNYLRPDIKRGPFTPQEEKLVIQLHAILGNRWAAIASQLAGRTDNEIKNLWNTHLKKRLVCMGIDPQTHEPIASSHYYPLSKSHSSIATRHMAQWESARLEAEARLSKDSSLFNNNNIPSFASNKTDSDSDYFLKIWNSEVGQSFRSVRKSDDGDDDDDKTRCISSMSQEGSSCNNTKCGSVSAITTITDLASSTLASNVKEDFEWRNYKSFDIGCDDSSSSNDLEDSSDTALQLLLDFPSNNDMSFLE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2300 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Tpr7g2300 307 SUPERFAMILY Homeodomain-like 10 109 IPR009057 -
Tpr7g2300 307 SMART sant 67 115 IPR001005 -
Tpr7g2300 307 SMART sant 13 64 IPR001005 -
Tpr7g2300 307 CDD SANT 16 62 IPR001005 -
Tpr7g2300 307 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Tpr7g2300 307 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Tpr7g2300 307 MobiDBLite consensus disorder prediction 205 235 - -
Tpr7g2300 307 PANTHER PROTEIN ODORANT1-LIKE 1 306 - -
Tpr7g2300 307 Gene3D - 11 68 - -
Tpr7g2300 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Tpr7g2300 307 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Tpr7g2300 307 MobiDBLite consensus disorder prediction 205 222 - -
Tpr7g2300 307 Gene3D - 70 117 - -
Tpr7g2300 307 CDD SANT 70 113 IPR001005 -
Tpr7g2300 307 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Tpr7g2300 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2300 Tpr-Chr7 29936915 29940133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2300 1 307 MYB Transcription Factor Family AT3G61250 60.645 8.84e-122 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g2300 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2300 K09422 - gmx:100816569 398.282