Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2270 ATGGAGGAGAGTCCTTGTGATTCTGATTGTGATTTCGTTGCTGCTGCTGCTCAAGATTTGCAGGAAGAGGATGACGCCCATGTCGACGAGGGCAAAAGCTTAGGGGCTCCTGAGGAGTTTAATGTAGGTCGATTTTATGAAATTGACCATTCCAACCTTCCACCTGATTGTCCTGTTCAAGTAAAATGTGTGAACATTGTAATGGTCAGTGGCACTGGGGAGGGACAAGTATATCTGAGGTATCCAAGCTGCGGCTCTCTTTGCACGCACTTCAACGACCAAAGCTTTTGGGAGAAAATCCCTGAACTTGATGAGAAGTATGTGATCGGAGTCGAATTCGCCATCAAAACACTTTGCAGGAGCATCACATACGAGGAATTTTCTCAAAGAAGAAACTCATGGAGCTTCTGGGCCTCTCCGACAAAAGAAAACTTTCAAAACCATGACAGTCCAGTTCCAGTTATCAATGATGCTTTTACTAGTTTGGTTTCCAAGCAGGGTTCGTGTTGGTCTGAACTCAAGTTCACGGCGGGTATGATGCAGTGGGGCCAACGCCGGCAAGTTCGGTTCTTGGGCCGTTGTGAGGAGCAAAAGGTTGAATCTTTAAGTAAACTTAATAAGGAAAAAGGAGTCATTTTTCAACCCAGGGAAGGGACTAATAAGAAGAAAAGAAAGAATGTTGAAGAAGAAATGGATGCCGTAAAGGTGGCTCCTTTTGGGGTACCGAGGATGACTCGTGAATGCAAGAAAAACCAAGGTGCGAGTAGTAGCAGTGGGGCTAAAAAGTCTATGAAAGCAGTAAACGACACCAAGGAGCAGCAACTCGTTGTTTATGGCAAAAAGAAGCGAAAAATATCTATTGACAGATGGTCTGCTGAGAGGTATAAGCTGGCCGAGGAAAGCATATTGATTATTATAAAGGAAAAAGAAGCTGTGTATGGAAATCCAATAATGAGGCCAGACTTGAGATTAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCTGGAGGAGTTGAAAGATTTAGAAGGCGACACAATGCGGAAGGCTTAATGGAGTACTGGTTAGAGAGTGCTGATCTTGTTGATATCAGAAAGGAAATAGGTGTCCAAGACCCTTACTGGACTCCTCCCCCTGGATGGAAGCCTGGCGACAGCATTTCACCAGATCATGTTACTAGTAATGAAATCAGAAAGATAAAGGAGGAAATAAATAAGCTGAAACGAGATATGCAGGAGCTTGCATCAAAGAAAGAAAAGGAAGCATTGGTCACTGTGGCTACTCCTAGTTCTTGTTTGTCAAGTTTGAATTGTAAGGACTATGGTTCTCAGGTTTCTAATCAGGAGATTTATGTGGAGCTGGTTCATAAAAAGGCTAAAATTGAAGAACAACTAAGAGAAATTTCTCTGGCTTTGAATGGCATGGAGGATCAACTGGGAAGGCTGAAAGAACCAATAATGTCAGAATCATTAACACCACAAACGTTAACATCAATGACGGAAAACATTGTGGAGAAGACAAGGGAGAAGAAAAATTGGAATAATAACAAAGAAACAAAATCAGCAGACACACAAATGCTAGGAAGCACAGCAGTAGAGGACAGGGCAGCAAAGATAGAAAGACTGAAAAGTAGTTTCCGAATTTGCAAACCAAGAGGGACCTTTATGTGGCCAAATATGAGTATGTCTCCACAAGTTGTGGCCAACCTTGATGAACACACTATGGTCCTAACCCCAGGCTCAGCTTCCTCTTCTACCACCGCACCTCCGAAGCTTATATCCAAATCTCAGACTCCTAACTTGCTATTGTCCCTACCTTGCCCTTCTTCTCCTGTTAAGCCACTGGCAGAGAGGCGCGCTGTGAGCATAACTACTTTGGCACATGTCACTGGACCATTTTCCCCTCCATTAGAGACTACTACCATCACCAAAAGCAGTTCTTCTATTAACCTTAATGAGACTCCTCTGGATCAGGAGTAA 2019 0.4339 MEESPCDSDCDFVAAAAQDLQEEDDAHVDEGKSLGAPEEFNVGRFYEIDHSNLPPDCPVQVKCVNIVMVSGTGEGQVYLRYPSCGSLCTHFNDQSFWEKIPELDEKYVIGVEFAIKTLCRSITYEEFSQRRNSWSFWASPTKENFQNHDSPVPVINDAFTSLVSKQGSCWSELKFTAGMMQWGQRRQVRFLGRCEEQKVESLSKLNKEKGVIFQPREGTNKKKRKNVEEEMDAVKVAPFGVPRMTRECKKNQGASSSSGAKKSMKAVNDTKEQQLVVYGKKKRKISIDRWSAERYKLAEESILIIIKEKEAVYGNPIMRPDLRLEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGLMEYWLESADLVDIRKEIGVQDPYWTPPPGWKPGDSISPDHVTSNEIRKIKEEINKLKRDMQELASKKEKEALVTVATPSSCLSSLNCKDYGSQVSNQEIYVELVHKKAKIEEQLREISLALNGMEDQLGRLKEPIMSESLTPQTLTSMTENIVEKTREKKNWNNNKETKSADTQMLGSTAVEDRAAKIERLKSSFRICKPRGTFMWPNMSMSPQVVANLDEHTMVLTPGSASSSTTAPPKLISKSQTPNLLLSLPCPSSPVKPLAERRAVSITTLAHVTGPFSPPLETTTITKSSSSINLNETPLDQE* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2270 672 MobiDBLite consensus disorder prediction 249 264 - -
Tpr7g2270 672 Coils Coil 410 437 - -
Tpr7g2270 672 MobiDBLite consensus disorder prediction 649 672 - -
Tpr7g2270 672 Coils Coil 471 491 - -
Tpr7g2270 672 MobiDBLite consensus disorder prediction 247 266 - -
Tpr7g2270 672 PANTHER PROTEIN DYAD 35 658 IPR044221 GO:0007131|GO:0051177|GO:0051321
Tpr7g2270 672 Coils Coil 509 529 - -
Tpr7g2270 672 PANTHER PROTEIN DYAD 35 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2270 Tpr-Chr7 29544985 29549834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2270 281 370 PHD Transcription Factor Family AT5G22260 37.234 2.85e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2270 - - var:108339226 753.821