Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2253 ATGGAAGGTGAATGCTACCACAAGAATTGCTTTAGGTGTGCTCATGCAGGGTGCCCTCTCACACATTCAAACTATGCTGCACTTGATGGTGTCCTCTACTGTAGGGTCCATTTTGCACAACTTTTCATGGAGAAAGGTAACTATAGCCATGTACTCAAATCTGCACACAAGAGGAATGGTTCTTCTCCACTTTCTGAAACAACACTTGAAGTTGTTGAAGAGCCTTCACAACCAGCAGAAGCTGATGAAGCACCTGAAGACCAACCAGCTGAAGAAACCTCTTGA 285 0.4456 MEGECYHKNCFRCAHAGCPLTHSNYAALDGVLYCRVHFAQLFMEKGNYSHVLKSAHKRNGSSPLSETTLEVVEEPSQPAEADEAPEDQPAEETS* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2253 94 Gene3D Cysteine Rich Protein 1 93 - -
Tpr7g2253 94 PANTHER OS06G0237300 PROTEIN 1 91 IPR045268 GO:0051015
Tpr7g2253 94 ProSiteProfiles LIM domain profile. 1 44 IPR001781 -
Tpr7g2253 94 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 51 - -
Tpr7g2253 94 MobiDBLite consensus disorder prediction 54 94 - -
Tpr7g2253 94 MobiDBLite consensus disorder prediction 76 94 - -
Tpr7g2253 94 Pfam LIM domain 2 41 IPR001781 -
Tpr7g2253 94 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 91 - -
Tpr7g2253 94 MobiDBLite consensus disorder prediction 54 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2253 Tpr-Chr7 29371266 29371550 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g2253 LIM 1.4e-07 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2253 - K09377 lja:Lj0g3v0318729.1 134.806