Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2250 ATGGATATAGCTTTTAGCTTACCACAATCGAAAGTAGCTTTGACTGGTTTGGATTCCTGTGTTTTGTTTAGAAGTAGAAGCTCTGGATGTGGTTTTATTTGTAATTCAAGGAATATTTTGAAAGGATATTGTGGAAGAGACTTCCGAGTTTCGAATTTGAAGTCGAATTTGTTGGGTAGGAGTAGTAAACTTTTTAGGGGAAATAGGGGGGTTTTGTTGAAGTGTCAGGGAAATGATTCGTTTGATTATGATAATGGAAATGGTAGGAGTGTCGATAATTTTAAAGGTTTGAATGAGGATTCTGATTTGGGGTCGATTTCCGGTGCGGAATTGGGTGAACCGATTGGAGAAGGTGGGGGTCAAGTAGAAGTAGAGGTGCAAAATGTGGATGAATTGAAGGAATTGTTGCAAAAGGCTTTGAAAGAATTAGAAGCTGCTAGAGTGAATAGTATTGTGTTTGAGGAAAAGGTTAAGAAGATATCGGAGACTGCGATATCGTTGCAGGATGAAGCAGCAAGAGCTTGGAATGATGTTAATTCTACACTTGATGTTGTTCAGGAAATTGTTTGTCAAGAATTTATTGCTAAAGAAGCTGTTCAAAATGCAACAATGGCTCTTTCTTTAGCTGAGGCAAGGCTTCAAGTAGCTGTCGAATCTTTGGAGGTTGCAAATGAAGATTATAGTTCTGTGCAAGGTTCGAACGAGAGTGATGGCGGTAAAGGTATAGTGCAAGAGGAGAAAGAACGAGTGGTTGCTCTGGAAGATATCAAGGAATGTCAGACAACTTTAGCGTGTTGTGAGGCTGAGTTGAAGCGATTGCAAAGTAAAAAAGAGGAGTTGCAAAATGAAGTGAACAAGTTGCATGAAATTGCTGAAAAAGCACAGTTGATTGCAGTTAAAGCGGAGGAGGATGTCACAGACATAATGCACTTGGCCGAGCAAGCTGTTGCCTTTGAACTAGAGGCTGCAAAACGTGTTAACGATGCAGAAATTGCATTTCAGAGAGCAAACAAGTCTGTCACTGGCATTAATGATGATACCACTGACACTCTACAAGTACAAGATGTTGTGGCCCTCCCCAAGGAGGAGAATTTGGTTCAACAATTTTCTGGTGATGCTGCTGTTAAAGGAGAGCTCGAGTTATCAAGTAATGACGAGTCTTTGCTTGCCACGGGTTCACTAGAGACACAGTCTAACAAATCCAGCCAAGTCTCGGAAGACATAACTCAATCTGATTATCTGAGTGATCATGATAATGGACAGTTAAGCTTAGACTCTTCTAAAGAATCTGAACCCGAAGTCGAGAAGTCAAAAAGTGCAGTTCAAACAAAAAAACAGGAAAACCACAAAGATTTGACTAGAGATAATTCACCATCTGCTCCCAAGACATCATTGAAGAAATCTTCCCGATTTTTTCCTGCTTCATTTTTCTCTTCTAGCACAGATGAGATTGATTACTCACTAGCATCACTTTTCAATGGTCTTGTGGAATCTGCACAGAATCAATTACCCAAGCTGATTGTTGGGTTATTGTTAATTGGAGCAGGGGTCACCTTCTATTCCAACCGACCAGAGAGGAGTTCTCAGCTGCTTCAGCAGCCTGAAGTCATTACAGCCACTGTTGAAGAAGTTTCCTCAAGTGCAAGGCCTCTAGTTAGACAACTAAAGGAACTCCCCAATAGAATTAAGAAAGTTATTGCATCGTTACCTGATCAAGAGGTGAATGACGAGGAAGCCTCCCTCCTTGACATGCTCTGGCTATTACTTGCAAGTGTTATATTTGTCCCGCTGTTTCAAAAAATTCCTGGAGGGAGTCCTGTTCTTGGTTACTTGGCTGCTGGAATCTTGATTGGGCCTTATGGACTCTCCATCATTCGCAATGTTCACGGGACAAAATCAATAGCCGAATTTGGAGTTGTTTTCCTATTATTTAATATTGGTCTGGAGCTCTCTGTGGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGTTGACTGCCGCAGTTATTGGGTTGGTGGCTCATTATATTTGTGGCCAAGCTGGCCCTGCTGCTATTGTTATTGGGAATGGCCTGGCATTATCATCAACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAGGCGAAAGCACATCGCGACATGGGCGAGCTACATTTTCCGTGTTACTTTTTCAGGATTTGGCCGTTGTTGTCTTGCTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGCTTTCAAGCCATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCTGCAGTTTCCATCACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCTATATATAGGCAGATTGCAGATAATCAGAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTGTTCTTGGGACCAGCCTTCTCACTGCCAGGGCAGGCCTGTCCATGGCTTTGGGAGCATTTTTGGCTGGTTTGCTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTATTGGGCCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTCTTTCAAACTTTCCTGTCATCATAGGGACACTGGGACTCTTGATATGTGGCAAGACCCTCTTGGTTGCTTTGATTGGCAAAATTTTTGGTGTTTCAATAATATCTGCCATTAGAGTTGGGCTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCCCAGTTGTCCTCTTTGCTGTTCCTTGTTGTGGGAATTTCAATGGCGCTTACACCCTGGTTGGGTGAAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAACATGATGTACGAAGCTTATTACCTGTAGAAAGTGAGACAGATGATCTGCATGATCATATCATTATTTGTGGATTTGGGCGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGACTTATTCCTTTTGTTGCACTAGATGTGCGAAGTGATAGAGTGGCAGTTGGGCGCTCCTTGGATCTCCCTGTGTACTTCGGTGACGCTGGTAGTCGAGAGGTCCTACATAAAGTTGGGGCTGGAAGGGCAAGTGCTGCAGCAATAACTCTAGATTCCCCTGGTGCAAACTATAGAACAGTTTGGGCTCTGAGCAAACACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATGTTACTCACGGATTGAATTTAGAAAAAGCTGGTGCTACCGCCGTTGTCCCAGAGACCTTGGAGCCAAGTCTTCAACTAGCAGCAGCAGTGCTTTCTGAGGTTAAACTTCCTGCATCAGAGATTGCGGCAACAATTAATGAATTCAGATCCCGTCATCTGGCTGAGCTTACAGAACTATCTGAAACAAGTGGAAGTTCTCTTGGATATGGATATAGCAGAATCATGAGCAAACCCAAATCCCAATCTCCGGATACAATTGACGACAGCCAAGTCCATGAAGGGTCAATGTGA 3552 0.4288 MDIAFSLPQSKVALTGLDSCVLFRSRSSGCGFICNSRNILKGYCGRDFRVSNLKSNLLGRSSKLFRGNRGVLLKCQGNDSFDYDNGNGRSVDNFKGLNEDSDLGSISGAELGEPIGEGGGQVEVEVQNVDELKELLQKALKELEAARVNSIVFEEKVKKISETAISLQDEAARAWNDVNSTLDVVQEIVCQEFIAKEAVQNATMALSLAEARLQVAVESLEVANEDYSSVQGSNESDGGKGIVQEEKERVVALEDIKECQTTLACCEAELKRLQSKKEELQNEVNKLHEIAEKAQLIAVKAEEDVTDIMHLAEQAVAFELEAAKRVNDAEIAFQRANKSVTGINDDTTDTLQVQDVVALPKEENLVQQFSGDAAVKGELELSSNDESLLATGSLETQSNKSSQVSEDITQSDYLSDHDNGQLSLDSSKESEPEVEKSKSAVQTKKQENHKDLTRDNSPSAPKTSLKKSSRFFPASFFSSSTDEIDYSLASLFNGLVESAQNQLPKLIVGLLLIGAGVTFYSNRPERSSQLLQQPEVITATVEEVSSSARPLVRQLKELPNRIKKVIASLPDQEVNDEEASLLDMLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKSIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLLTAAVIGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVSITAIIAGGRLLLRPIYRQIADNQNAEIFSANTLFVVLGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIIGTLGLLICGKTLLVALIGKIFGVSIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLGEGGQLIASRFEQHDVRSLLPVESETDDLHDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRSLDLPVYFGDAGSREVLHKVGAGRASAAAITLDSPGANYRTVWALSKHFPNVKTFVRAHDVTHGLNLEKAGATAVVPETLEPSLQLAAAVLSEVKLPASEIAATINEFRSRHLAELTELSETSGSSLGYGYSRIMSKPKSQSPDTIDDSQVHEGSM* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2250 1183 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1182 - -
Tpr7g2250 1183 Gene3D - 986 1149 - -
Tpr7g2250 1183 MobiDBLite consensus disorder prediction 393 465 - -
Tpr7g2250 1183 Coils Coil 256 297 - -
Tpr7g2250 1183 ProSiteProfiles RCK N-terminal domain profile. 989 1111 IPR003148 GO:0006813
Tpr7g2250 1183 Coils Coil 122 149 - -
Tpr7g2250 1183 Pfam TrkA-N domain 990 1103 IPR003148 GO:0006813
Tpr7g2250 1183 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 986 1127 IPR036291 -
Tpr7g2250 1183 MobiDBLite consensus disorder prediction 422 456 - -
Tpr7g2250 1183 MobiDBLite consensus disorder prediction 393 421 - -
Tpr7g2250 1183 Pfam Sodium/hydrogen exchanger family 587 957 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr7g2250 1183 Gene3D - 577 962 IPR038770 -
Tpr7g2250 1183 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1182 - -
Tpr7g2250 1183 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 588 868 IPR004771 GO:0006812|GO:0008324|GO:0016021
Tpr7g2250 1183 MobiDBLite consensus disorder prediction 1161 1183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2250 Tpr-Chr7 29341153 29351684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2250 70 1183 Inorganic Solute Cotransporters AT4G00630 70.364 0.0 1414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2250 - - gmx:100791174 1657.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2250 7 29341153 29351684 Tpr7g2250 7 29341153 29351684 ECH