Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2247 ATGTCGACTGAAGTACGGGATGAAGTTGATATTGATGAAATTGAACTTCTTACAAATGTTGATTTCCCTCAAGCCATTAACATTGATGATTGGATTCCTTGTCAAGGTCAAATTTTTGATAGTGATGATGATGCTTATAATTTTTACTCTTCGTTTGCACAAAGAAGTGGTTTCTCAATTAGACGTCATCACGTTTATAGAAACACTACTGATGAGGGAAATCCACAAACAGTTTACAAAAGAGAGTTCGTTTGCCATCGATCCGGGGTTTCTAAATCAGTCAAAGTTAATGAACTGGAAAGTCAAAGGAAACGGAAAACTTCAAGGTGTAGTTGTAGTGCTAGATTGGTGGTTGCTAAAGAGACAATTGGATCGGAAGAAAAATGGGTGGTAATATATTTCAACAATGTCCACAACCATGATTTGTTAGATGAGAAAGAGGTTCAATTTCTCCCTGCTTATCGTAACATCCCGGTTGTTGACCAAAACCGTATACTAATGATGTATAAAGCTGGTTGTTCCATTAATGTCACAATGAGATTGCTTGAATTAAAGAAAGGAATAGATGTAGGTAGTCTACCATTTATGGATAAAGATATTAGGAATTTCCTTCAAAACCAAAGTGGTATTGACAAACAAAATGATGCTTTAGATGTCTTGAAATTGTGTAAAGGGTTGAAAGAGTTAGATGATGCCTTCCAATATGATTACACAATAGATGAGAATAAGAAGTTGGAACACATTATTTGGGCATTTGGTGATTCAATCCGTGCATATGAATCTTTTGGGGATGTGGTTGTCTTTGATACTACTTATCGAATAAATCGTTATGATATGCCACTTGGAATATGGCTTGGAGTTGACAATCATGGGAATTCAGTTTTTTTTGGTTGTGTTCTATTACGAAATGAGAAGATTTCTTCGTTCACATGGGCTTTAAAGAATTTCCTAGCTTTTGTCAAAGGAAAGAATCCACAAACAATTCTTACAGATCAAGATCCCTCGCTTAAAGAAGCCATTGCAAATGAATTTCCGAACACAAAACATGCCTTTTGCATATGGCACATTTTGGCAAAGTTGCCAAGTTGGTTTTCGTTTGTATTAGGTGCAAGATATAATGACTTTAAATCTGAGTTTTTCAAGGTGTACCATTTAGATTGTGAAGATGATTTTGAACAATATTGGAAATCCATGGTTGCACAATTTGGTCTAAGTAACGATATACATATTAAATTGTTGTATTCTCTTCGCCAACGTTGGGCTCTAGCTTATTTGAAGGACTTTTTTTTTGCTGGGATGACAACAACTGGACGTTCGGAATCGATAAATTCATATATAAAACACTTCTTGGATGCCAAAACAAGTTTGACTGATTTTATTACTAGGGTTGGTGTTGCTGTCCAAATTAGGAATCAAGCTGGAGAGGAAGCAAGAATGCGTCAAAAGTATCATAATCATCTACTTAAAACAAGTTTTCCAATGGAGGAACATGTTGCATCTATACTCACACCTTATGCTTTTGGGTTGATTCAAATTGAGATTGAGTTATCTACAAAATACGCTGCAACTGAAACAAACAGTGGCTCTTTTATTGTGAAGCATCACACCAAAGATGATGGAGGTCGTCTTGTAACTTGGATAGAAGGTCAAGAATCAATTCGTTGCTCTTGTAAGGAATTTGAGTTTTCTGGAATATTGTGCAGGCATGCTATTCGAGTGCTTCTAATGAAAAATTATTTTCACATACCTTCAAAGTATCTTCCTTTTCGATGGAGACGTGAAAGTTCATTGATCCCAAAATCTAGTCACATAGTAAACAACAATGATGTCTCCTCTGCTGAGTTTCATTCTCTGATTCAATGTATTGAATATGAATCTTTAAAAACAAAAGAACGGAAACAAATTGCTACTAAAGGGTTGGAGGATCTTATCCGAGAGATAAAAGGAATGTCCGAAAGTCATGAAGATCAAATTGGTTTGGAAGTTGTTCCAAATAATGATGAATGTGATGTTGGAATTCCAGTTAGAACTAGAAGCAAAGGTCGACCAAAAGGTTCAAAGGCAAAAGTAGTAGTTGAAGTTGTTTCAAATAATGATGAATGTGATGTTGGAAATCCAGTTAGAACCAAAAGCAAAGGTCGACCAAAACGATCAAGGCCAAAAGGAGGAGTTGAAGCTGCAACCAAGATTCGCCATTGTCATATTCCGAATTGTGGTGCAACCGGCCATGACACACGGAATTGTCCAAACAAAAGGAAACATAATGACATATTGCCTAATGAATCACCTAATGAGTTCAAAAAGGGTTGGAGAAATTCATCTAATTAA 2328 0.3595 MSTEVRDEVDIDEIELLTNVDFPQAINIDDWIPCQGQIFDSDDDAYNFYSSFAQRSGFSIRRHHVYRNTTDEGNPQTVYKREFVCHRSGVSKSVKVNELESQRKRKTSRCSCSARLVVAKETIGSEEKWVVIYFNNVHNHDLLDEKEVQFLPAYRNIPVVDQNRILMMYKAGCSINVTMRLLELKKGIDVGSLPFMDKDIRNFLQNQSGIDKQNDALDVLKLCKGLKELDDAFQYDYTIDENKKLEHIIWAFGDSIRAYESFGDVVVFDTTYRINRYDMPLGIWLGVDNHGNSVFFGCVLLRNEKISSFTWALKNFLAFVKGKNPQTILTDQDPSLKEAIANEFPNTKHAFCIWHILAKLPSWFSFVLGARYNDFKSEFFKVYHLDCEDDFEQYWKSMVAQFGLSNDIHIKLLYSLRQRWALAYLKDFFFAGMTTTGRSESINSYIKHFLDAKTSLTDFITRVGVAVQIRNQAGEEARMRQKYHNHLLKTSFPMEEHVASILTPYAFGLIQIEIELSTKYAATETNSGSFIVKHHTKDDGGRLVTWIEGQESIRCSCKEFEFSGILCRHAIRVLLMKNYFHIPSKYLPFRWRRESSLIPKSSHIVNNNDVSSAEFHSLIQCIEYESLKTKERKQIATKGLEDLIREIKGMSESHEDQIGLEVVPNNDECDVGIPVRTRSKGRPKGSKAKVVVEVVSNNDECDVGNPVRTKSKGRPKRSRPKGGVEAATKIRHCHIPNCGATGHDTRNCPNKRKHNDILPNESPNEFKKGWRNSSN* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2247 775 MobiDBLite consensus disorder prediction 746 761 - -
Tpr7g2247 775 Pfam SWIM zinc finger 549 578 IPR007527 GO:0008270
Tpr7g2247 775 Pfam FAR1 DNA-binding domain 47 143 IPR004330 -
Tpr7g2247 775 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 31 653 - -
Tpr7g2247 775 Pfam MULE transposase domain 265 358 IPR018289 -
Tpr7g2247 775 SMART 26again6 553 580 IPR006564 GO:0008270
Tpr7g2247 775 MobiDBLite consensus disorder prediction 746 775 - -
Tpr7g2247 775 ProSiteProfiles Zinc finger SWIM-type profile. 530 578 IPR007527 GO:0008270
Tpr7g2247 775 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 653 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2247 Tpr-Chr7 29314703 29318680 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g2247 FAR1 9.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2247 - - var:108339217 813.142