Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2245 ATGCATGATGTCAGAATTAGAATGATAGCTGTTGGAATCTGTGGGAGTGATATTCAGTACCTCAAGGTAGATATTGTTACCGTTACATCCGATTTCAATATTCGACAAAAAAATATAAATCCGATTTCAGTTTCCAACATAATCTATTTTATGGTTAAAGAACCGATGGCTATTGGTCACGAGTGTGCTGGGATCATAGAAGAAGTCGGTAGTCAGGTACAGACTTTGGTGCCTGGTGACCGTGTGGCCGTCGAGCCTGGGATCAACTGTTGGCCTTGTGAACATTGCAAACTTAGTCGATATAATCTTTGCCCTGAGATGATGGTTTTTGCTACTCCACCAGTTTATGGTTCCTTGGCTAATCAGAAAAATGTGACAGGTGCCGGTGCAATTGTGGTTGTGATATGGTTGTGGACACAATTTTGTTAA 429 0.4126 MHDVRIRMIAVGICGSDIQYLKVDIVTVTSDFNIRQKNINPISVSNIIYFMVKEPMAIGHECAGIIEEVGSQVQTLVPGDRVAVEPGINCWPCEHCKLSRYNLCPEMMVFATPPVYGSLANQKNVTGAGAIVVVIWLWTQFC* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2245 142 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 59 73 IPR002328 GO:0008270|GO:0016491
Tpr7g2245 142 PANTHER SORBITOL DEHYDROGENASE 2 124 - -
Tpr7g2245 142 SUPERFAMILY GroES-like 2 127 IPR011032 -
Tpr7g2245 142 PANTHER SORBITOL DEHYDROGENASE 2 124 - -
Tpr7g2245 142 Gene3D - 1 135 - -
Tpr7g2245 142 Pfam Alcohol dehydrogenase GroES-like domain 2 126 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2245 Tpr-Chr7 29296146 29296763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2245 3 109 Monolignol Biosynthesis Gene Families AT4G37980 25.926 3.16e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2245 K00008 - gmx:100791559 155.992