Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2212 ATGCCTCGTGGAACACTTGAAGTTGTTTTGATCAGTGCCAAAGGCCTTGAGGACAATGATTTTCTCTCTAGCATAGATCCTTATGTGATTCTTACTTATAAGTCACAAGAGCACAAGAGTAGTGTGCAAGAAGGTGCTGGATCTAACCCTCAATGGAATGAGACTTTTCTTTTCACTGTTTCTGACAGTGCTTCTGAGCTCAATCTAAAGATAATGGAAAAGGACAACTTTACTAATGATGATAATATTGGAGAAGTAGTAATTCATTTAGATGCCGTGCTTGAAGAGGGTAGCCTTCCAGAGACTACCTACAATATTGTGAAGGACCAAAAGTTTTGTGGTGAGATTAAGGTTGCTCTCACTTTTACTGCTGAGAGAAATATTGAACGGAGTTACAATGCTGATGATGAAATCATTGGTGGATGGCAACAATCAGCTAGAGATTATTGA 450 0.3889 MPRGTLEVVLISAKGLEDNDFLSSIDPYVILTYKSQEHKSSVQEGAGSNPQWNETFLFTVSDSASELNLKIMEKDNFTNDDNIGEVVIHLDAVLEEGSLPETTYNIVKDQKFCGEIKVALTFTAERNIERSYNADDEIIGGWQQSARDY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2212 149 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 149 - -
Tpr7g2212 149 PANTHER C2 DOMAIN-CONTAINING 1 149 - -
Tpr7g2212 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Tpr7g2212 149 Pfam C2 domain 4 105 IPR000008 -
Tpr7g2212 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Tpr7g2212 149 SMART C2_3c 5 102 IPR000008 -
Tpr7g2212 149 Gene3D C2 domain 2 124 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2212 Tpr-Chr7 28858007 28861148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2212 4 94 C2H2 Transcription Factor Family AT4G21160 31.868 7.47e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2212 - - gmx:100500006 233.417