Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2201 ATGTATAGATTATTGGATGTAACCAATAACAATGGCACAAGATTTGTAAGCCTTGTTTTTGAGTATCTTGATTGTAATCTTTCTCAATACATTAAAGAGAATCAACGCTATGGTTCATGTTCATCTTTTAATGATCCCATCAATATAAAGAGTTTTATGTATCAGATTCTGTCTGCAGTGGAATATTGCCATTGTCATGAGATTATTCACAGAGATTTGAAACCAACAAATCTTCTAATCGATCGTTCTGAAAAGATAATCAAATTGGCTGATTTTGGTTTGGCTAGAGAGTTAGGAGATCCTGACATGATGTATACTAGGAAGGTAGCAACTTTGTGTTATAGAGCACCTGAAATATTGTTTGGATGTGGTAAATATTCAACTCCAATTGATATTTGGTCAGTGGGCTGTATATTTGGTGAGATGTTACTTGAAAAACCATTACTCGAAGGAAAATATTGGATGGATGAATTAGAAATGTTTTTCAGTATGTTCGGTACCCCAACAGAGGAAACGTGGCCTGGGATCACTAAATTGTGTACTAACATTACAACCTATCCCAAATATGAACCAGTGGACCTATCAACAATGTTTTATGATCTTGATCCAACTGGTCTTAATCTTCTAACGACAATGCTTTGCCTAGACCCAAACAAGAGGATTACTGCCGAAGCTGCTCTAAAGCATGCTTATTTTAAAGGCTTGGTCTTGCATCCGGTTATTAAAGGAAAATAG 735 0.3565 MYRLLDVTNNNGTRFVSLVFEYLDCNLSQYIKENQRYGSCSSFNDPINIKSFMYQILSAVEYCHCHEIIHRDLKPTNLLIDRSEKIIKLADFGLARELGDPDMMYTRKVATLCYRAPEILFGCGKYSTPIDIWSVGCIFGEMLLEKPLLEGKYWMDELEMFFSMFGTPTEETWPGITKLCTNITTYPKYEPVDLSTMFYDLDPTGLNLLTTMLCLDPNKRITAEAALKHAYFKGLVLHPVIKGK* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2201 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Tpr7g2201 244 Gene3D Phosphorylase Kinase; domain 1 11 22 - -
Tpr7g2201 244 Pfam Protein kinase domain 7 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2201 244 SUPERFAMILY Protein kinase-like (PK-like) 5 236 IPR011009 -
Tpr7g2201 244 PANTHER CELL DIVISION PROTEIN KINASE 3 238 - -
Tpr7g2201 244 SMART serkin_6 3 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2201 244 Gene3D Transferase(Phosphotransferase) domain 1 23 234 - -
Tpr7g2201 244 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2201 244 PANTHER CYCLIN-DEPENDENT KINASE 3 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2201 Tpr-Chr7 28728386 28734402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2201 3 235 Core Cell Cycle Gene Families AT3G48750 50.000 9.95e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Tpr7g2201 Pkinase 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2201 K02206 - gmx:100799974 250.366