Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2200 ATGAGTTTTGGGGGTTTTGTAGAAAACAATTCAGGTGGTGGTGGTGGAGGTGTGAGAAACAACAACATAGGAGAAATTTCTTACAGCAACGAAAGAATGCCATTTGGTTCTTTCTCTCAACCTCGTCTTGTTACAACTCCTGCTTTGGCTAAATCTATGTTCAACTCTCCTGGATTATCACTTGCACTTCAAACGAATATTGATGGACAAGAAGATGTGAATAGATCAATGCATGAAAATTTTGAGCAAAATGGTTTGAGAAGAAGTAGAGAAGAAGAACAAAGTAGATCTGGTAGTGATAACTTGGATGGTGTTTCTGGTGATGAACAAGATGCTGATGATAAACCACCTAGGAAAAAGAGATATCACCGACACACTCCTCAACAGATTCAAGAGCTTGAAGCTTTGTTTAAGGAGTGTCCTCACCCAGATGAGAAGCAAAGATTGGAACTTAGCAAAAGACTTTGTTTGGAAACTAGACAGGTTAAGTTTTGGTTCCAAAATCGAAGAACACAAATGAAGACTCAATTGGAAAGGCATGAGAACAATTTGCTTAGGCAAGAGAATGATAAGCTAAGAGCTGAAAATATGTCTATAAGGGATGCAATGAGGAATCCTATATGTTCAAATTGCGGTGGTCCGGCTATGATCGGTGAAATTTCACTTGAGGAACAACATCTTCGAATCGAGAATGCAAGGTTGAAGGATGAGCTAGATAGAGTTTGTGCACTTGCTGGAAAGTTTTTAGGCCGTCCAATTTCTTCATTACCGAACTCGAGTTTAGAGCTTGGTGTTGGTGGAAATAACAACAATGGTTTTAATGTGATGAACAATGTTTCATCAACATTACCTGATTTTAGTGCTGGAATGTCTAATAATCCGTTGGCCATTGTGTCTCCTTCGACTAGACAAACCCCTTTGGTCGGTGGATTTGATAGATCGGTCGAAAGGTCTATGTTTCTTGAACTTGCTTTGACTGCTATGGATGAGTTGGTTAAGATGGCACAAACTAGTGAGCCTCTCTGGATTAGGAGTATAGAAGGGGGAAGGGAAATTTTGAACCATGAGGAATATATGAGAACTTTCACTCCTTGCATTGGTTTGAAGCCCAATGGTTTTGTCTCCGAGGCCTCTAGAGAGACCGGTACGGTCATTATCAATAGCTTGGCCCTTGTCGAGACTCTTATGGACTCGAATCGATGGATAGAGATGTTTCCTTGCATCATTGCAAGAGGCTCAACAAATGAAGTGATAGCAAATGGAATACATGGAACTAGAAATGGTGCACTTCAACTAATGCAAGCTGAACTTCATGTACTATCGCCTTTAGTTCCGGTTCGCGAGGTAAATTTCCTTAGGTTTTGCAAGCAGCATGCAGAAGGGGTTTGGGCTGTGGTTGATGTGTCCATAGATAGCATAAGAGAAACTTCTGGAGCTACAAGTTTTATGAACTGTAGGAAGCTTCCTTCTGGTTGTGTTGTGCAAGATATGCCCAATGGTTATTCCAAGGTGACATGGGTGGAACATGCAGAGTATGAGGAAAATCAAGTACACCAGCTGTACAGACCATTGTTGAGCTCAGGTATGGGATTTGGCGCGGCACGTTGGGTCGCTACCCTACAACGCCAGTGTGAGTGCCTTGCCATATTAATGTCTTCCGCTGCACCTTCTCGAGACCACTCCGCAATAACAGCGGGCGGAAGGCGAAGCATGCTCAAGCTAGCACAACGTATGACGAACAACTTCTGTGCAGGGGTATGTGCCTCAACAGTCCACAAGTGGAACAAGCTTAGCCCTGGAAATGTGGACGAAGACGTGAGGGTGATGACACGGAAGAGCGTTGACGATCCTGGCGAGCCACCGGGGATTGTGTTGAGCGCAGCCACGTCGGTTTGGCTCCCCGTTTCGCCTCAAAGACTATTCGATTTTCTGCGTGACGAGAGGCTCCGTAGTGAATGGGATATACTATCTAACGGTGGTCCCATGCAAGAGATGGCTCATATTGCCAAAGGACAAGATCATGGAAACTGTGTTTCTCTTCTTCGTGCTAGTGCGATGAATTCGAACCAGAGTAGCATGTTGATACTACAAGAAACATGCATAGACGAGGCAGGGTCGCTTGTAGTCTACGCACCAGTCGATATTCCAGCCATGCATGTTGTGATGAATGGTGGCGATTCAGCTTACGTGGCATTACTACCATCTGGGTTTGCCGTTGTCCCCGATGGACCTGGATCCCGTGGTTCCGAGAATGGGGACGCCACTGCAAACGGAGGTGAGGCACGAGTCAGCGGTTCGCTTTTAACCGTAGCGTTTCAAATCCTTGTGAATAGTCTTCCAACAGCAAAACTCACTGTCGAGTCAGTTGAAACGGTTAACAATCTCATTTCTTGCACCGTTCAGAAAATCAAAGCTGCACTTCAATGTGAAAGTTAA 2436 0.4446 MSFGGFVENNSGGGGGGVRNNNIGEISYSNERMPFGSFSQPRLVTTPALAKSMFNSPGLSLALQTNIDGQEDVNRSMHENFEQNGLRRSREEEQSRSGSDNLDGVSGDEQDADDKPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENNLLRQENDKLRAENMSIRDAMRNPICSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLPNSSLELGVGGNNNNGFNVMNNVSSTLPDFSAGMSNNPLAIVSPSTRQTPLVGGFDRSVERSMFLELALTAMDELVKMAQTSEPLWIRSIEGGREILNHEEYMRTFTPCIGLKPNGFVSEASRETGTVIINSLALVETLMDSNRWIEMFPCIIARGSTNEVIANGIHGTRNGALQLMQAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRETSGATSFMNCRKLPSGCVVQDMPNGYSKVTWVEHAEYEENQVHQLYRPLLSSGMGFGAARWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLSPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVVPDGPGSRGSENGDATANGGEARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2200 811 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 68 808 - -
Tpr7g2200 811 SUPERFAMILY Bet v1-like 315 546 - -
Tpr7g2200 811 CDD START_ArGLABRA2_like 317 545 - -
Tpr7g2200 811 Coils Coil 170 202 - -
Tpr7g2200 811 CDD homeodomain 118 176 IPR001356 GO:0003677
Tpr7g2200 811 Pfam START domain 322 546 IPR002913 GO:0008289
Tpr7g2200 811 MobiDBLite consensus disorder prediction 81 98 - -
Tpr7g2200 811 Gene3D - 105 192 - -
Tpr7g2200 811 MobiDBLite consensus disorder prediction 81 126 - -
Tpr7g2200 811 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 68 808 IPR042160 -
Tpr7g2200 811 SUPERFAMILY Homeodomain-like 104 176 IPR009057 -
Tpr7g2200 811 ProSitePatterns 'Homeobox' domain signature. 151 174 IPR017970 GO:0000981|GO:0006355
Tpr7g2200 811 Pfam Homeodomain 119 174 IPR001356 GO:0003677
Tpr7g2200 811 SMART START_1 322 546 IPR002913 GO:0008289
Tpr7g2200 811 SMART HOX_1 117 180 IPR001356 GO:0003677
Tpr7g2200 811 SUPERFAMILY Bet v1-like 574 804 - -
Tpr7g2200 811 ProSiteProfiles START domain profile. 313 549 IPR002913 GO:0008289
Tpr7g2200 811 ProSiteProfiles 'Homeobox' domain profile. 116 176 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2200 Tpr-Chr7 28707250 28715412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2200 1 811 Homeobox Transcription Factor Family AT3G61150 64.784 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr7g2200 START 1e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2200 K09338 - gmx:100811873 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2200 7 28707250 28715412 Tpr7g2200 7 28707250 28715412 ECH
Tpr7g2200 7 28707250 28715412 Tpr6g1691 6 18160660 18169585 ECH