Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2189 ATGCTCAAAGAACTTAGGTTGAATGCTTATGAAAATGCTCAAATTTATAAAGATAGGACTAAGAAATTGCATGATAGGCGCATACTTAGGAGAGAATTCAAAGGAGAGCTTGTGCTCCTCTTTAACTCTAGATTAAGATTATTTCTTGGAAAACTCCGTTCCCGATGGTCAGGACCATTCGAAGTCACTAGAGTTTTCCAAAGTGGCGCAATAGAAATAAAGAGCCAATCCAATGAAACCTTCACAGTCAATGAGCAACAATTAAATTATGCATGCAGAAACACTACACAAACATGGGAGGAGGTGACAAAAATTCCAACAGATGATGATGGACATCGATGGAGAAAGTATGGCCAGAAAAAGATCAACAATTCTCAATACTCAAGGAACTACTATGTCTATAGGTGTACTCACAAGTATGATCAAAGTTGCCTAGCAACCAAACAAGTGCATAGAATTCAACAAAAACCTCCCTTATATAAGACCACATATTATGGCCACCACACTTGTGGAAAATACATGTCTAACCCTCACATCATACTTGATCCTAATATTCACACTAATTCCTCCATATTGCTTAGCTTTAACAACACATTCCCTAATCCAACAAAACAAGAATGTCCATTTTTATCATCATCATCATCATCATTATTATCAACATCACCATCTCTTTCCTCATCACCTAATTCATTGGAGTATAAGGATGATGTTCCCTCATCTTCCTTAGATGATAATTTGCTTTCTCCTAATCCCACTTTAGATGATTCTATTTCTACAAGGCATGTTAGTACTATTACTATATCATCAACACTTGATGAATTTGATCACAAGGATATGATGTATGGGTTCTCAAATGATTTTGTTGAGTTTGATGATGATTTCTTTCACCCTTTTAATGGGTTTTCATGA 909 0.3575 MLKELRLNAYENAQIYKDRTKKLHDRRILRREFKGELVLLFNSRLRLFLGKLRSRWSGPFEVTRVFQSGAIEIKSQSNETFTVNEQQLNYACRNTTQTWEEVTKIPTDDDGHRWRKYGQKKINNSQYSRNYYVYRCTHKYDQSCLATKQVHRIQQKPPLYKTTYYGHHTCGKYMSNPHIILDPNIHTNSSILLSFNNTFPNPTKQECPFLSSSSSSLLSTSPSLSSSPNSLEYKDDVPSSSLDDNLLSPNPTLDDSISTRHVSTITISSTLDEFDHKDMMYGFSNDFVEFDDDFFHPFNGFS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2189 302 ProSiteProfiles WRKY domain profile. 103 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g2189 302 MobiDBLite consensus disorder prediction 221 243 - -
Tpr7g2189 302 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 73 266 IPR044810 GO:0003700
Tpr7g2189 302 Gene3D WRKY domain 93 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g2189 302 SUPERFAMILY WRKY DNA-binding domain 103 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr7g2189 302 Pfam WRKY DNA -binding domain 109 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr7g2189 302 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 73 266 - -
Tpr7g2189 302 SMART WRKY_cls 108 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2189 Tpr-Chr7 28558547 28561571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2189 109 199 WRKY Transcription Factor Family AT2G46400 46.154 1.11e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr7g2189 WRKY 1.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2189 - - mtr:MTR_8g032510 236.113