Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2186 ATGGCTGGAGCTGAAGCTACTAAATATGCTTCTGTTACAAACAACATAACCAAATCAAAAAAACCAAACATGAGAAGATTCATTGGTGTTAGACAAAGACCATCAGGTAGATGGGTGGCTGAGATCAAAGATTCATCTCAACATGTAAGATTATGGCTTGGAACCTATGATACACCAGAAGAAGCAGCTCGAGCTTATGATGAAGCGGCTCGAGCTTTACGCGGAGAGAATGCTCGAACCAACTTCTCCGTGGCAACATCAATAGACAATACTACACCATGTAGTGATGATCAAGGAATAATAACATCATCAATATCAAATGAAGGAAAAAATAACAGTTTAACTTTTGCTTCATTGAAAGCAAAATTAAGCAAGAATCTTCAAAGTATTATGGCAAGAACAAGTGATCATAGCAATAACAAATTTTCAAAGAGTAGAGTGAGTGATCATTTTACTTTTGCTAGCATATTCAACCGTAGGAACAATTATAATCAAATCTCTGCTTTAGATATGAAAAGCATTGAAAAAGTGGTGCAGCCTAGTATCATTGTTCCTTCTATTGAACCTTCTAGTGTTTCTGATTGTAGTTCTGAATGGTTTGGATCATTTCAGAATCATGGATTAGATTCTGATGGATCTGATATAGTTGAGAACAATAATGTTAATGTTAGTGTTGGTGATCAAGGTTTTTTGGATCAACTTATGGGGTGGATTGATGATGATACTTCTGATATTTGTGAAGGTTCAAGTAGTAAAAGGTTTAAGGTATCTTCATCTGTTCTTGTGCCACCAACTTTCTCTAGTTCTCCTTATGATTGTGGTTCACCTTATAGTGGTTATGCTTCTCCTTATAATAGTTGTGGTTCCCCTTGTAATGGTTATGCCTCGCCTTATTATGGTAGCAAGAAGTAA 912 0.3607 MAGAEATKYASVTNNITKSKKPNMRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFSVATSIDNTTPCSDDQGIITSSISNEGKNNSLTFASLKAKLSKNLQSIMARTSDHSNNKFSKSRVSDHFTFASIFNRRNNYNQISALDMKSIEKVVQPSIIVPSIEPSSVSDCSSEWFGSFQNHGLDSDGSDIVENNNVNVSVGDQGFLDQLMGWIDDDTSDICEGSSSKRFKVSSSVLVPPTFSSSPYDCGSPYSGYASPYNSCGSPCNGYASPYYGSKK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2186 303 SUPERFAMILY DNA-binding domain 27 84 IPR016177 GO:0003677
Tpr7g2186 303 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 249 - -
Tpr7g2186 303 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Tpr7g2186 303 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Tpr7g2186 303 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 249 - -
Tpr7g2186 303 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Tpr7g2186 303 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Tpr7g2186 303 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Tpr7g2186 303 CDD AP2 26 82 IPR001471 GO:0003700|GO:0006355
Tpr7g2186 303 Gene3D AP2/ERF domain 25 85 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2186 Tpr-Chr7 28534802 28536236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2186 17 83 AP2-EREBP Transcription Factor Family AT5G19790 69.118 1.40e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Tpr7g2186 AP2 1.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2186 K09286 - gmx:100799444 347.821