Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2183 ATGGGCCTGTTTGTTTTGGTTTTTTTTCAAAATGATTTTTGTCGTATTGTTCAAGTTCTTAAAAAACTAAATAAGGGTGTTGACAGTATCGGAATATCTATGTTAATTTCTTTCCTTGTATTAGCCATCAAAAGTAAGCATTTTTTTTTATATCTTAGCAAATTAAGAAAAGTGAAGTTTAAAATAAAAGGGCAAAGTCACAAACCCTACGCAGCTACGCCTTCAGTTGTTCAGCCGTTTCTCTTAAACTCGGGTTCACTTCTTTGTATTATACTCTCTTTTATCATGGAGTCTGACGAGCCCCAGTCGGCGGAACTGAGTAAGTACACTGGTCCAGTAGCTGGTGTCAAGCTGTTAATTGTGGATGCTGACTTAGCACGCCGAGCATTTATATCAAAATTTCTTCTTTCACTTGGATATGAGATTTTGACTGCTACACTAGCTTCTGACGCATTATCCATTATTGGGGAGAAGTGGAATGAGATTAACATTGTGCTTGTGGATGTTCAGTTGCCAGATATGGAAATATATGATCTCATACAAAAAATGAAAGAAAACACTAATATCCCATTCCCATCTTTCATTAGGAATGCTTATGATAAGAGCCTCATATCAAAAGCTTTAGGTACTGGAGCTATGTTATGTTTAAGAACTGCGGGTGATCTACAGCAGCTTATGGATGTGGAAGGACTTCCAAAAGAGACTGTTTCAAACTATTTACAGAAATATCGTCAATCTATGAATCTACGTGCAAGTCCAGTGGCACAGCATTTGAATGGGTATGTGTCTATTACTAAGAAAAGTCGAGGAAAACACCCTCTATCCTTAAAGAAAAAAGGTGCGACCAACAATCCAGCTTTCAATCGGAAGGATCTCAATAAACCTTTACGTGCACCTGTTCTTGGTACTTCAGCACGATTTCTTACCCTGGAAAGCTCAAGTTCGCAGGAGTCACCTTTCAGCCAAAATCAACTGTCACCGCCATGGAAACAGGAAGTTGTCGAGCACTCCACATCCGGCCTTGGTAGGTTTTTAAATTGTGTTAATGGTGACGCATCTGAAAAAATCAGGCAGGTTATAAATACTGCTGATGGAAAAGTTTCTAATGCCGGACAACAATTGAATTTTTCAACACTGATGGCCTTTAACATGTCCAATCAATTTTGGCCAGCACTTCCTATTGCTCTACTACCACCCGAGGAAAATGAAAAGATTGATGAGATTTTTTATACAAAAGAAAGTCAGATTTTTACTGATGAGGATTTGAATATGTGGTTGTCGACAATTCCAGACAATGTGAATCGTGATGCTATTGCTTGA 1320 0.3833 MGLFVLVFFQNDFCRIVQVLKKLNKGVDSIGISMLISFLVLAIKSKHFFLYLSKLRKVKFKIKGQSHKPYAATPSVVQPFLLNSGSLLCIILSFIMESDEPQSAELSKYTGPVAGVKLLIVDADLARRAFISKFLLSLGYEILTATLASDALSIIGEKWNEINIVLVDVQLPDMEIYDLIQKMKENTNIPFPSFIRNAYDKSLISKALGTGAMLCLRTAGDLQQLMDVEGLPKETVSNYLQKYRQSMNLRASPVAQHLNGYVSITKKSRGKHPLSLKKKGATNNPAFNRKDLNKPLRAPVLGTSARFLTLESSSSQESPFSQNQLSPPWKQEVVEHSTSGLGRFLNCVNGDASEKIRQVINTADGKVSNAGQQLNFSTLMAFNMSNQFWPALPIALLPPEENEKIDEIFYTKESQIFTDEDLNMWLSTIPDNVNRDAIA* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2183 439 PANTHER TWO-COMPONENT RESPONSE REGULATOR 224 428 IPR045279 GO:0009736
Tpr7g2183 439 PANTHER TWO-COMPONENT RESPONSE REGULATOR 115 217 IPR045279 GO:0009736
Tpr7g2183 439 MobiDBLite consensus disorder prediction 312 331 - -
Tpr7g2183 439 ProSiteProfiles Response regulatory domain profile. 117 233 IPR001789 GO:0000160
Tpr7g2183 439 SUPERFAMILY CheY-like 115 222 IPR011006 -
Tpr7g2183 439 SMART REC_2 116 229 IPR001789 GO:0000160
Tpr7g2183 439 Gene3D - 116 248 - -
Tpr7g2183 439 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 115 217 - -
Tpr7g2183 439 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 224 428 - -
Tpr7g2183 439 Pfam Response regulator receiver domain 119 226 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2183 Tpr-Chr7 28506780 28525466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2183 114 286 Response Regulator Gene Family AT4G16110 24.713 7.29e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g2183 Response_reg 1.2e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2183 - K07648 mtr:MTR_8g032710 223.402