Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g2182 | ATGATGGGTGGAGGTGGCAATTTGGTTAGTACAATAATTGGATTTGGAATGAGTGCAACTTTCATTGTATTTGTATGTGCAAGAATAATTTGTGGAAGATTTAGAGAAAGGCATGTGAGATCACGTACTATATATGAGATTGAATCAAGACCAGATATTGAACGGCCAGAATATCATGCTAATGAACCTGAACCTGCATTTGTTGCTGCAATCCCCACTTTAAATTTCAACCAAGAAGCCTTCAGTGCCATCCAATGTACACAGTGTGTGATATGTTTAGGAGATTATAAAGAAAAAGAAGTATTGCGCATAATACCTTATTGTGGACACACTTTTCATCTTTCTTGCATTGATATGTGGCTAAGAAAACAATCTACATGTCCTGTATGTCGTTTGACATTGCATAATGTTTGTGAAGAAAAACATGTGAGACCTGTCACATTCACCATAATACAATCTCTCAATGAGTCTAATACTCCACAAGGGAACAGTGATAATGAGAGACAAGTTGAAGTTAATGCAAGAGAAACAGAATCAGGGTTGTGA | 546 | 0.3663 | MMGGGGNLVSTIIGFGMSATFIVFVCARIICGRFRERHVRSRTIYEIESRPDIERPEYHANEPEPAFVAAIPTLNFNQEAFSAIQCTQCVICLGDYKEKEVLRIIPYCGHTFHLSCIDMWLRKQSTCPVCRLTLHNVCEEKHVRPVTFTIIQSLNESNTPQGNSDNERQVEVNARETESGL* | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g2182 | 181 | Pfam | Ring finger domain | 88 | 131 | IPR001841 | - | |
Tpr7g2182 | 181 | CDD | RING-H2_EL5_like | 88 | 131 | - | - | |
Tpr7g2182 | 181 | SUPERFAMILY | RING/U-box | 88 | 137 | - | - | |
Tpr7g2182 | 181 | ProSiteProfiles | Zinc finger RING-type profile. | 89 | 131 | IPR001841 | - | |
Tpr7g2182 | 181 | PANTHER | OS11G0150450 PROTEIN | 1 | 172 | - | - | |
Tpr7g2182 | 181 | PANTHER | OS02G0676500 PROTEIN | 1 | 172 | - | - | |
Tpr7g2182 | 181 | SMART | ring_2 | 89 | 130 | IPR001841 | - | |
Tpr7g2182 | 181 | MobiDBLite | consensus disorder prediction | 155 | 181 | - | - | |
Tpr7g2182 | 181 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 137 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g2182 | Tpr-Chr7 | 28498440 | 28501499 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g2182 | 78 | 134 | C3H Transcription Factor Family | AT4G10160 | 54.386 | 7.93e-19 | 79.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g2182 | - | - | cam:101509791 | 309.301 |