Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2157 ATGCCGCTTGATTCCTCTGAACAAGATGATGACCCCGAAATTGAGTTCTCCGAAATTGATCCTACCGGGAGATATGGTCGGTACAAGGAAGTTTTAGGGAAGGGGGCTTTTAAGAAAGTATATCGAGCTTTTGATGAGTTGGAAGGAATTGAAGTGGCATGGAATCAGGTTAAGGTGTCCGATCTATTGCGTAATTCTGAAGATTTGGAGCGACTTTATTCTGAAGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATTATTAAATTTTATAGTTCATGGGTTGACACAAAGAATGAGAATATTAACTTTATAACTGAGATTTTCACATCTGGAACATTGCGCCAATATCGGAAGAAACATAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGTCTTTCATATCTTCATAGTCATAATCCACCAGTTATTCATCGAGACCTTAAGTGTGACAATATTTTTGTCAATGGGAATCAAGGGGAGGTGAAAATTGGCGATTTAGGATTGGCAGCCATTCTTCAACAGGCCAATTCAGCTCACAGTGTTATAGGTACTCCGGAGTTTATGGCCCCGGAACTTTATGAAGAGGAGTACAATGAGCTTGTTGACATTTATGCTTTTGGCATGTGCTTGCTAGAATTGGTAACTGTTGAGTACCCATATGTTGAATGTGCCAATGCCGCTCAAATATACAAGAAAGTGACATCTGGAATAAAACCAGCATCGTTGGCAAAAGTAAATGATCCTGAAGTTAAAGCATTTATAGAAAAGTGTACTGCTCATGTATCGGAACGGTTGCCTGCAAAGGCTCTCTTGATGGATCCCTTCCTTCAGTCAAATTGGGATGGTGAAAGCGTTGGTCTATCTTCAAGATCTAGAAACCAACATTCAGGAGATAACTTTGATAATCAATCCATTGAAAAAAGTGCCAAAGATAATTTTGTTGAGACAAGTAGGGAATTTACAGTGGAAGGCCAGAGGAGAGATGTTAATACAATATTTTTAAAACTTAGAATCGCAGATTCCTCAGGGCATATTCGAAATATCCACTTTCCTTTCGATATTGGAGCAGATACTTCATTCTCTGTTGCTAGTGAAATGGTTGAGGAATTGGAGCTTACTGATCAAGATGTTTCGACTATTGCTATGACTATTGACTCAGAAATTAGATACCACATTCCCAGTTGGAGTCCAAGTGAAACTCCTGACAATAATTATTATTATCAAGCTTCAGGCCAAACCCCTGAAACTATGCTTGTGGCATCTCCTATGGGAAATGAATCTCCTGGCAGTCTTGCTTTAGAGATATTACCTTCAGGTCGTAAGTACTGGTCAGACTCACCCAAGACTTTTGGTGCAAACTCTCCATCTCTGCTGCACGGTGCTTCAAACTTGTCTTATGAAGTGGAATGTGATGGAACCGCTGATTCCCCTTTCAATAAAAGTATTACATCAGACTATCTGGAAGCAACTGGTGGAAAGTTCTCTCAAGAAAAAATGTCTGTTAGTTTAACAGATTTTGAAACAGAAGACATTAATAAAATAGCAACCAAGTTGGAGACTATGTTGGTTATGCAACGAGAGGAGTTAGATGAATTGAAGAGGAAGCACAAATTAGCTGTCTCGGATTTTTTGAATGAATTTTCTTCAGAAGTTTCTCTACAAGTTCTAAACATCTGCAACATGCAGATGCCTGACAGTGAAATGTAG 1731 0.3899 MPLDSSEQDDDPEIEFSEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVSDLLRNSEDLERLYSEVHLLKTLKHKNIIKFYSSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVNDPEVKAFIEKCTAHVSERLPAKALLMDPFLQSNWDGESVGLSSRSRNQHSGDNFDNQSIEKSAKDNFVETSREFTVEGQRRDVNTIFLKLRIADSSGHIRNIHFPFDIGADTSFSVASEMVEELELTDQDVSTIAMTIDSEIRYHIPSWSPSETPDNNYYYQASGQTPETMLVASPMGNESPGSLALEILPSGRKYWSDSPKTFGANSPSLLHGASNLSYEVECDGTADSPFNKSITSDYLEATGGKFSQEKMSVSLTDFETEDINKIATKLETMLVMQREELDELKRKHKLAVSDFLNEFSSEVSLQVLNICNMQMPDSEM* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2157 576 CDD STKc_WNK 24 284 - -
Tpr7g2157 576 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Tpr7g2157 576 MobiDBLite consensus disorder prediction 294 316 - -
Tpr7g2157 576 SUPERFAMILY Protein kinase-like (PK-like) 28 285 IPR011009 -
Tpr7g2157 576 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2157 576 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 342 396 IPR024678 GO:0004674|GO:0005524
Tpr7g2157 576 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 4 572 - -
Tpr7g2157 576 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2157 576 Gene3D - 338 424 - -
Tpr7g2157 576 SMART serkin_6 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g2157 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Tpr7g2157 576 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Tpr7g2157 576 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 572 - -
Tpr7g2157 576 Coils Coil 523 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2157 Tpr-Chr7 28206955 28211829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2157 102 575 MAP Kinase Kinase Kinase AT3G48260 56.842 1.84e-170 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr7g2157 Pkinase 2.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2157 K08867 - gmx:100272204 810.831