Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2145 ATGGAATCTAAACCCTTGAACGCTATTAAGATCCTCTATAGCTACGGTGGCAAAATCCTTCCTCGTTCCACTGACGGTGAACTCCGTTACGTCGGCGGTCACACTAGAGTTCTCTCCGTTGATCGTTCAATTTCATTCTCAGAATTGATGGAGAAACTCGAAGAATTGTGTGGTTCATCTGTCAAGTTAAGGTTTCAATTACCAAACGGAGACTTGGAAATGTTGATCTCAATCACCAACGACGAAGATTTAGCCAATATAATCGATGAATACGAACGTGTCTCGTTGAGATTAACTCATCCGTTGAAGATCAGAGCCATTCTTTCGCAGCCGAAATTGCTTTCTTCTGATCCGTCGTCTGCTTCGTCCAGTGCCACTCTTTCTCCGTCAAGATCGCCTCATACCTCCGCTGAATCGCTGCCGTACGCGGTGGCATATCGCATCGGACGACATAGTCGCTCGCCGCGTGCGCCGTTCGGTTATTCGTTCGGCGTCAAGAATGGTGGATCGGCGAAAGCTTGTTGCAATATGGGCCAGTTCTATGGAAGCCCAAGGTCCTTTTATTATGGGCCTCGTTGCAATAATTACTGCCATTAA 597 0.4707 MESKPLNAIKILYSYGGKILPRSTDGELRYVGGHTRVLSVDRSISFSELMEKLEELCGSSVKLRFQLPNGDLEMLISITNDEDLANIIDEYERVSLRLTHPLKIRAILSQPKLLSSDPSSASSSATLSPSRSPHTSAESLPYAVAYRIGRHSRSPRAPFGYSFGVKNGGSAKACCNMGQFYGSPRSFYYGPRCNNYCH* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2145 198 MobiDBLite consensus disorder prediction 114 136 - -
Tpr7g2145 198 SUPERFAMILY CAD & PB1 domains 25 108 - -
Tpr7g2145 198 CDD PB1_UP2 14 108 - -
Tpr7g2145 198 PANTHER PB1 DOMAIN PROTEIN 1 198 - -
Tpr7g2145 198 PANTHER OS05G0427100 PROTEIN-RELATED 1 198 - -
Tpr7g2145 198 Pfam PB1 domain 26 98 IPR000270 GO:0005515
Tpr7g2145 198 SMART PB1_new 23 102 IPR000270 GO:0005515
Tpr7g2145 198 Gene3D - 29 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2145 Tpr-Chr7 27831310 27832313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2145 1 97 MAP Kinase Kinase Kinase AT3G46920 42.268 9.52e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2145 - - gmx:100810563 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2881 5 51949424 51950615 Tpr7g2145 7 27831310 27832313 PCT