Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2135 ATGCATACTAATGTTCCTGCTGCTCCACATCCTCCAGCCATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGCATAGCTGAGAGATTACGCAGAGAAAGAATCGCAGAAAGAATCAGGGCGTTGCAAGATTTGGTTCCAAGTGTCAACAAGACAGATAGAGCTGCCATGTTAGATGAAATTATGGATTACGTCAAGTTCTTAAGGCTTCAAGTGAAGGTGTTAGATATGCTTGAAGATGCTTGTGAATCATTGCTAGAAAACATTTTGGCAGAAAATAAACATATACAAGAGGTGGCAAAAGTGGACAGTTACCAGTATTTCATGTTTTGTAACACTTGGAATTGGAGGTGGTATTAA 375 0.4213 MHTNVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQDLVPSVNKTDRAAMLDEIMDYVKFLRLQVKVLDMLEDACESLLENILAENKHIQEVAKVDSYQYFMFCNTWNWRWY* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2135 124 Pfam Helix-loop-helix DNA-binding domain 29 73 IPR011598 GO:0046983
Tpr7g2135 124 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 82 - -
Tpr7g2135 124 Gene3D - 21 104 IPR036638 GO:0046983
Tpr7g2135 124 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 87 IPR036638 GO:0046983
Tpr7g2135 124 PANTHER TRANSCRIPTION FACTOR UNE12 ISOFORM X1 3 82 - -
Tpr7g2135 124 SMART finulus 30 79 IPR011598 GO:0046983
Tpr7g2135 124 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 24 73 IPR011598 GO:0046983
Tpr7g2135 124 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2135 Tpr-Chr7 27614588 27628269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2135 11 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 79.167 1.42e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g2135 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2135 - - twl:120008096 129.028