Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2133 ATGGCATCATCAAGCTCATACAATTCACCATGTGCAGCCTGCAAATTTCTTCGTCGAAAATGCATGCCAGGTTGCATTTTCGCACCATACTTTCCACCAGAAGAGCCACAAAAATTCGCAAACGTTCACAAGATCTTTGGCGCAAGCAACGTGACAAAGATCCTCAACGAACTCCTCCCTCACCAAAGAGAAGATGCAGTGAATTCACTTGCTTATGAAGCGGAAGCGCGCGTGAGGGATCCGGTTTATGGCTGTGTTGGTGCTATTTCTTTCCTTCAGAGACAAGTTCAACGGCTTCAAAAAGAACTTGATTCTGCTAATGCGGATCTTCTTCGATTTGCTTACAATGATTCATCTCTTCCACCTCTTCCTCCTCTTGTTGTTCCGGCTTCGTTTCATCATCATCATCATCATCAACAATTAACACCTCAGAGACAATTACAGTTTGGTTCAAGATTTGGTAATGGTGGTAATATTGATGGAAGTGGTTTTTACTCTTTTCCTTATGCTATTCCATGGAATGATACCTCTTCTGATGATTTAAGTGGAGGTGTAGGAGGAAGAGGAGGAGGTGTAGGAGGAGGTAATTTGTGA 594 0.4293 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKILNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRFAYNDSSLPPLPPLVVPASFHHHHHHQQLTPQRQLQFGSRFGNGGNIDGSGFYSFPYAIPWNDTSSDDLSGGVGGRGGGVGGGNL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2133 197 Coils Coil 89 109 - -
Tpr7g2133 197 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Tpr7g2133 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 185 - -
Tpr7g2133 197 PANTHER ELONGATED PETIOLULE 1 1 185 - -
Tpr7g2133 197 MobiDBLite consensus disorder prediction 178 197 - -
Tpr7g2133 197 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2133 Tpr-Chr7 27571712 27574182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2133 1 119 AS2 family AT5G63090 88.333 1.01e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr7g2133 LOB 3.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2133 - - cam:101513806 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2890 5 52043873 52046535 Tpr7g2133 7 27571712 27574182 PCT