Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2128 ATGAGTAGTTTTCCTAGTCCTATGGAGACGGAGCAAAACCCTACAACCGATCAAAACGGTGCCGCTTCACAACACTCACCTGCACCTCCTCCTCTTCCGCTGGAGGATAAAGTTCTTGTCCCTATCGAGGTTTGCTTAAAACCTTCCAGCACAGCTTCCATTCACGATGTCCGTTCAGCAGTAGAGGGGATGCTTGAAAAGAGGAGTTTGAGCTATAATGGTGGACCAATTCCGGTTCCCCTTGATGAACCCTTTCTTGCAGATAACGTGCAAAGAATTTGCGTATGTGATACAGGTGAAGGGATGCAAAATGACAATGTTCTTTTGTTCTGGCAAGTCAAGCCTGTTGTACATGTCTTTCAGCTTAGGGAGGAAGGACCGTGTGAGGATATCAGCTCTGATGGCCAGTCTTCTAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGCCTGATATATGAATCTGGTCTAAAGCAAAGGTTGTTGCGGTATGCAGCGAGTGCTTTGCTCTTCACTGAAAAGGCTGTTGATCCATTCCTTGTTTCATGGAACCGCATAATTCTTTTGCATGGACCCCCTGGGACTGGAAAGACGTCCTTATGTAAAGCATTAGCTCAGAAACTATCAATTCGATTCAATTCAAGATACCCACAGGCCCAGCTTGTTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCCGAAAGTGGCAAGCTGGTTGCAAAACTTTTTCAGAAGATTCAAGAAATGGTTGAGGAAGATAGCAATCTGGTATTTGTTTTGATCGATGAAGTCGAAAGCCTCGCTGCTGCTAGAAAAGCTGCTTTGTCCGGTTCTGAACCTTCGGATTCCATTCGGGTTGTCAATGCATTATTAACTCAGATGGATAAGTTAAAATCATCGCCAAATGTGATCATTCTAACCACATCCAACATTACTGCTGCTATCGATATTGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGTCCACCAACACTTCAAGCTCGGTATGAAATATTAAGGTCTTGCTTGCAGGAACTCATGCGTTCAGGGATATTAACTAGTTTTGAGGATTGTAAGAATACCGTGCTTCCAAATTATGCTAGTGCAAAACAGGGGATGAACACACCAGATTTTCATCAGCCTACTACATCCACGCAACTGTGCAAGCAACTAGTTGAAACTGCAGAGGCATGTGAGGGAATGAGTGGAAGGTCTCTCAGAAAGCTTCCTTTTTTGGCACATGCTGCACTTACAAATCCTTTTGATTGCAACCCTATCGAGTTCTTATGTACAATGATAGAAACTGCAAAGAGGGAGCGTTCTGAGCTTCCTGATTAA 1368 0.4335 MSSFPSPMETEQNPTTDQNGAASQHSPAPPPLPLEDKVLVPIEVCLKPSSTASIHDVRSAVEGMLEKRSLSYNGGPIPVPLDEPFLADNVQRICVCDTGEGMQNDNVLLFWQVKPVVHVFQLREEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRYPQAQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEDSNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRSGILTSFEDCKNTVLPNYASAKQGMNTPDFHQPTTSTQLCKQLVETAEACEGMSGRSLRKLPFLAHAALTNPFDCNPIEFLCTMIETAKRERSELPD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2128 455 Gene3D - 132 356 IPR027417 -
Tpr7g2128 455 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g2128 455 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 193 211 IPR001270 GO:0005524
Tpr7g2128 455 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 307 321 IPR001270 GO:0005524
Tpr7g2128 455 Pfam ATPase family associated with various cellular activities (AAA) 193 338 IPR003959 GO:0005524|GO:0016887
Tpr7g2128 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 423 IPR027417 -
Tpr7g2128 455 CDD AAA 191 339 - -
Tpr7g2128 455 MobiDBLite consensus disorder prediction 1 33 - -
Tpr7g2128 455 SMART AAA_5 189 341 IPR003593 -
Tpr7g2128 455 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 34 452 IPR044539 -
Tpr7g2128 455 ProSitePatterns AAA-protein family signature. 311 330 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2128 Tpr-Chr7 27407659 27414266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2128 193 359 Calmodulin-binding Proteins AT3G56690 30.178 1.80e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2128 K22399 - gmx:100795009 787.334