Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2092 ATGGATCCGGGAGCGATGATGAACGAGGGTTCATTTCCGAATGGGAATGGAAATACGACGCCGTTTAGTTTAGCGGAGATCTGGCAGTTTCCAGCTACGATTAATGGCGGCGAAGGTGGATTGGGATTAAGAAGACCACAGTTTGGTAACGGTTTAGGACAGTTTGCTGATTTTGGAACCGGTTCCAACCGGGATGTTAGTGGACCGGAGTCAAGAGTTGTTTTGAACCATGGTGGTGGGAAGAAGAGGCGTGACTCCGAAGATGATTCTGCTAAGTGTGTTTCCACCAGCAATGGCGGTGCCAATGCCGTGAATGACAGTGATGGAAAACGGACTAAAGCATCGGGGAACAGGAATGAAGGTGGTGATGGTAAAGTTGAAGGAGAAGCCAGTTCAGGAAAGCCTGCGGAGCAAAGCAGTAAGCCACCTCCTCCCGACCCTCCTAATCCTAAGCAAGATTACATCCACGTTCGAGCTAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCAGAACGCGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATCTAGTTCCTGGTTGTAATAAGGTTATTGGGAAAGCATTGGTCCTTGATGAGATAATTAATTATATCCAATCACTTCAGCGCCAAGTGGAGTTTTTGTCGATGAAGCTCGAAGCAGTAAATTCAAGACTGAACACCGGCATTGAAGCCTTTCCTCCAAAAGATTTTGGTCAACAAACATTTGATCTTGCCGGCATGCCATTTGTTTCACAAACTACAAGAGAACCAAGTAGAGGTTCGTCCCCAGAATGGTTACATATGCAGGTAGGCGGCGGTTTCGAAAGAACAACGTAG 855 0.4667 MDPGAMMNEGSFPNGNGNTTPFSLAEIWQFPATINGGEGGLGLRRPQFGNGLGQFADFGTGSNRDVSGPESRVVLNHGGGKKRRDSEDDSAKCVSTSNGGANAVNDSDGKRTKASGNRNEGGDGKVEGEASSGKPAEQSSKPPPPDPPNPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDFGQQTFDLAGMPFVSQTTREPSRGSSPEWLHMQVGGGFERTT* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2092 284 Gene3D - 160 236 IPR036638 GO:0046983
Tpr7g2092 284 Coils Coil 210 230 - -
Tpr7g2092 284 MobiDBLite consensus disorder prediction 258 284 - -
Tpr7g2092 284 MobiDBLite consensus disorder prediction 111 127 - -
Tpr7g2092 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 230 IPR036638 GO:0046983
Tpr7g2092 284 MobiDBLite consensus disorder prediction 76 91 - -
Tpr7g2092 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 213 IPR011598 GO:0046983
Tpr7g2092 284 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983
Tpr7g2092 284 SMART finulus 169 219 IPR011598 GO:0046983
Tpr7g2092 284 CDD bHLH_AtBPE_like 154 238 - -
Tpr7g2092 284 MobiDBLite consensus disorder prediction 35 153 - -
Tpr7g2092 284 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 284 IPR024097 GO:0006355
Tpr7g2092 284 MobiDBLite consensus disorder prediction 92 110 - -
Tpr7g2092 284 PANTHER BNAC05G07950D PROTEIN 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2092 Tpr-Chr7 26410316 26414247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2092 1 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 58.468 1.41e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g2092 HLH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2092 - - gmx:100784478 387.882