LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g2089	ATGGCGGGCAAGCAAGAGCTTGTGCTAGGTATCTGTGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATCTAGACCTGTTGCATATGAGATTGATACATCGGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGATAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGAAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTATGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAACGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCATCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATCTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGATAGGGATCCAAACAACAAGACAACAACAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGAACGGGTATTTTTTCAAACATAGAACGGTTGTTGTAGATGGATCCAAACATGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTCAATTCTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAACAAACAAATACAAAATGCCGTTATTTGAGATTGTCGGATTCACATCAACTGGGAGATCTTTCATTGTTGGATTTGCTTGGCTTACCAATGAAAGAGAAGACAACTTCACTTAG	903	0.4142	MAGKQELVLGICAPGIVEVPPDKPPSRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKIKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLCGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGHLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTTKQLYNLSHRLKLKMRASMTEMQHLSKRLVENGYFFKHRTVVVDGSKHVQDIFFAHPKSISLFNSFPTVLLMDSTYKTNKYKMPLFEIVGFTSTGRSFIVGFAWLTNEREDNFT*	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g2089	300	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	72	300	IPR031052	GO:0006355
	Tpr7g2089	300	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1	72	300	-	-
	Tpr7g2089	300	Pfam	Transcription factor AFT	87	138	IPR014842	GO:0000981\|GO:0036086
	Tpr7g2089	300	Pfam	MULE transposase domain	255	300	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g2089	Tpr-Chr7	26322419	26323321	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Tpr7g2089		AFT	4.6e-05	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g2089	-		-	cit:107176176	226.868