Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2085 ATGGAGATAAATGAATGTGAACCAATCGAAACCGATGAGCCCAAAGATATTTTTCTTGGTCAAGTTGTAAATAGCAAAGAAGAAGCTTATGATTTATACCAAGAACATGCCTTCAAAGTTGGTTTTAGTGTAAGAAAGGGGAAGGAGTGTTATTATGATAACGAGAAAAAGAATACACGGTTGAAAGACTTGTATTGTTCCAAACAAGGGTTCAAGAACAATGAACCTGACGGTGAAGTCGCTTATAAAAGAGCAGATTCAAGGACAAATTGTAAAGCTATGGTGAGATTTAATGTGACCAAGGAAGGAGTGTGGAAAGTTACAAAGTTGATATTGAAACACAATCATGAATTTGTTCCACTTCATCAAAGATATTTGTTACGTTCTATGAGAAATTTGTCAAATCTCAAAGAAGACCGCATAAAGTCTATGGTGAATGATGCCATTAGAGTTGGTGGATTTGACAAACATGGTGTAATGTTGAAAGATATGCATAATTATGTCTCCACTGAAAAGTTGAAATTTATTGAAGCCGGAGATGCTCAATCTTTACTGAATCACTTACAAAATAGACAAGCACAAGATTCCATGTTCTGTTACAGTGTGCAGTTAGACCAAGAATCACGTTTGACCAATGTCTTCTGGAGAGATGGTAAATCCGTAGTTGATTATAATTGCTTTGGGGATGTTGTGATTTTTGACACTACTTATCGTGATAATAAATACAACCTTATTTGTGCCCCATTTGTTGGTTTAAATCATCATTTGCAAAATATCATGTTTGGTTGTGCTTTGTTATTTGATGAAAGTGAAGTTTCTTTTGCTTGGTTGTTCAAAACGTTTTTGGAGAGTATGGGAAACCAACAACCAAAAACAATCTTTACAGCTCATGATCCAGCCATGGCTAAAGCGATCGGAGAGGTAATGCCAAATGCATGTCATCGTTTATGTTTATGGCACATAGCTAAGGTTGCTCCTTCACATTTGGATTCTCTCATTTCCGATCAAAAGTTTCAAAGCTTATTTAGTAAATGCATGGGAGATTGTGATTCAGAAGAAGAATTTCAAAGAACTTGGGATGAGATGATGAATGTGTATAAGCTTCAGGATCATCAATGGCTGAGCAATATGTATGAAATTCACCATAAGTGGAGCACTGCTTATAGCAAGAGTGTATTCTCTGCTGGTATCAAGTCCTGCCAAAGGATTGAGAGTACAAACAATGTGTTGGATGAGATTGCAGGGAAAACAACAACTCTCACACAATTTTTACTGGCATTTGAGAAGATGTTGAAAAAGTGGCGCCGCTTAGAGGTTGAGGAGGAATTCAAAAACAGCCAAAGCACACCTCCTCTTGTTATAAATATTAGTGAAACATTACGGCATGTGTCTACGGTATATACTCACAAAGTCTTTAATCTTTTTCTGAACGAGTATCTTGAAGGGACAGGTGGAAGCACTTCTATAGAGATTGGTCAATCTGATAATGTGTCAAATCATGAAGTCTTGTTGAACCATAAGCCTAATAAAAAATATACAGTGACATTTGACTCTTCCAATATGAAGATTAATTGTAGTTGCTGCAAGTTTGATTATATGGGCATTCTTTGTAGTCATGCTTTGCGAATTTATAACATTAAAGGTATTTTAAGAATACCTGACCAATACTTCTTAAAAAGATGGTCAAAAAATGCAAGGTCTGTGATTTATGAGCACATAAGTAGGGGAATGGGAGAAGATTCTACCTCCAATTTGGGGATCAATGATGATGATGCTGGTATTCCTTATCGCAATGCTATTATGAAGTCATTCTACTCTCTAGTTTTGGAAAGTCAAGACAGCAAAGAAGCTCAAAATATTATGTGGAAATTACTTGATATTGGAGTTGAGAGGGTGCAGAAAGGGGTCGGCAAGGGAAATTTAACTTCAGATGTAGAAACAATGGAGACAAATTTCAACGAAAATGAGGAATCGTGTTTCACACCAATGCTCTGA 1995 0.3634 MEINECEPIETDEPKDIFLGQVVNSKEEAYDLYQEHAFKVGFSVRKGKECYYDNEKKNTRLKDLYCSKQGFKNNEPDGEVAYKRADSRTNCKAMVRFNVTKEGVWKVTKLILKHNHEFVPLHQRYLLRSMRNLSNLKEDRIKSMVNDAIRVGGFDKHGVMLKDMHNYVSTEKLKFIEAGDAQSLLNHLQNRQAQDSMFCYSVQLDQESRLTNVFWRDGKSVVDYNCFGDVVIFDTTYRDNKYNLICAPFVGLNHHLQNIMFGCALLFDESEVSFAWLFKTFLESMGNQQPKTIFTAHDPAMAKAIGEVMPNACHRLCLWHIAKVAPSHLDSLISDQKFQSLFSKCMGDCDSEEEFQRTWDEMMNVYKLQDHQWLSNMYEIHHKWSTAYSKSVFSAGIKSCQRIESTNNVLDEIAGKTTTLTQFLLAFEKMLKKWRRLEVEEEFKNSQSTPPLVINISETLRHVSTVYTHKVFNLFLNEYLEGTGGSTSIEIGQSDNVSNHEVLLNHKPNKKYTVTFDSSNMKINCSCCKFDYMGILCSHALRIYNIKGILRIPDQYFLKRWSKNARSVIYEHISRGMGEDSTSNLGINDDDAGIPYRNAIMKSFYSLVLESQDSKEAQNIMWKLLDIGVERVQKGVGKGNLTSDVETMETNFNENEESCFTPML* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2085 664 ProSiteProfiles Zinc finger SWIM-type profile. 512 548 IPR007527 GO:0008270
Tpr7g2085 664 SMART 26again6 523 550 IPR006564 GO:0008270
Tpr7g2085 664 Pfam MULE transposase domain 230 323 IPR018289 -
Tpr7g2085 664 Pfam FAR1 DNA-binding domain 32 120 IPR004330 -
Tpr7g2085 664 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 644 IPR031052 GO:0006355
Tpr7g2085 664 PANTHER OS12G0160900 PROTEIN 12 644 - -
Tpr7g2085 664 Pfam SWIM zinc finger 512 543 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2085 Tpr-Chr7 26305166 26309013 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g2085 MULE 1.1e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2085 - - lja:Lj4g3v2120630.1 959.518