Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2081 ATGTTATGTTTGTTTGTTTCTTTGTTCTTGTTACAGATGAAGAGGTCTAGAGATGATGTTTACATGAGTTCACAACTCAAACGTCCTGTGCTGTCTTCTAGAGGAGAACCCTCGGGGCAACCCCAAGTGATGAGTGGTGGTCAGAAGTTAACGACAAATGATGCCTTATCATATCTAAAGGCAGTAAGAGAAATGTTTCAAGATGACAAAGAAAAGTATGATGAATTTTTGGAAGTCATGAAGGATTTCAAGGCCCAAAGAATTGATACGGCTGGTGTCATAGAAAGAGTGAAGGAGCTTTTTAAAGGGCATAAAGATTTAATTTTGGGGTTTAACACCTTCTTGCCAAAGGGATATGCAATTACACTTCCATCGGAAAATGAACCACCTCCACTGAAGAAGCCTGTTGAATTTGAAGAAGCTATCAATTTTGTTGGCAAGATCAAGACTCGTTTTCAGGGCAATGATCGTGTTTACAAGACTTTTTTAGACATATTAAATATGTACAGAAAGGAAACCAAGACTATCACCGTGGTTTACCAAGAGGTCTCTGCCCTCTTCCAAGACCATGCAGATCTTCTTGAGGAGTTCACTCATTTTCTTCCCGACACTTCTGGAGCAGCCGCTGCTCATTTTGCTTCTGCTCGTAATTCTCTCCGTGATAGGAACTCTGCAATGGCAACAGTGAGGCAAACACATGTTGAAAAGAGAGAAAAGACAATAGCTTTGCATGCTGATCGTGATCTCGGCGTTGATCATTCTGATCCAGAACTTGAGAGAGGTGTGATGAGGGTTGATAAGGAGCAGAGAAGACGCGAGAGAGAAAAGGACCGTAGAGAAGAAAGAGATAGGAGAGAAAGGGATGATAGAGATTATGATAATGATGGTAATCGGGACCGTTTATCCCACAAGCGAAAATCTGGTCATAGAGCTATTGACGCTGGTACTGAACCATCACATGATGCAGATGAAAAGCTTGACATGCACCCTATCTCATCCGCTTCCGAGGATAAAAGTTCTTTGAAAAGTATGTGTAGTCCAGTGCTTGCTTTCCTTGAAAAAGTCAAGGAGAAGTTAAGAAATCCCGAGGATTACCAGGAATTTTTGAAGTGCCTACATATCTACAGCAGGGAAATAATCACCCGATCAGAACTACTGGCATTGGTGGGTGATTTACTGGGAAAATATGCTGATATTATGGAGGGATTTGATGATTTTGTGACACAATGTGAAAAGAATGAAGGATTCCTTGCCGGTGTCATGAATAAAAAATCCTTGTGGAATGAAGGACATGGACCGAAACCAGTGAAGGTAGAGGACAAGGACAGAGATCGGGACAGGGATGACGGGGTGAAAGAAAGGGACCGTGAACTCCGAGAAAGAGACAAATCCACTGGAATTGCCAACAAGGATGTTTCTATTCCTAAGGTGTCTTTAAGCAAAGACAAGTATGTAGGAAAACCTATAAATGAATTGGACCTTTCTAACTGTGAACAATGTACTCCTAGTTACCGTCTTCTACCAAAAAATTACCCAATACCGATAGCTAGCCAAAGAACTGAACTTGGTGACGAAGTATTGAATGATCACTGGGTCTCTGTTACATCAGGAAGTGAGGATTATTCCTTTAAACACATGCGCAAAAATCAGTATGAAGAGAGCTTGTTTAGATGCGAAGACGACAGGTTTGAACTTGATATGTTGTTAGAGTCTGTAAATGTGACGAATAAGAAAGTTGAAGAGATCTTAGACAAAGTTAATGCTAATATAATTCAAGGAGACATCCCAATTCGTATCGAGGAGCACTTAACACCCCTAAATCTTAGGTGTATTGAACGATTATATGGTGACCATGGGCTTGATGTGATGGATGTGTTGAAAAAGAATGCATCTCTAGCTTTGCCGGTGATATTAACCCGCTTGAAGCAGAAACAGGAGGAGTGGGCAAGATGCCGTGCAGATTTTAATAAAGTTTGGGCTGAAATATATGCAAAGAATTATCACAAATCACTTGATCACCGAAGCTTTTACTTTAAGCAGCAGGATACAAAAAGCTTGAGCACTAAAGCCTTATTGGGAGAGATCAAAGAAATTAGTGAGAAGAAACGAAAAGAAGATGATGTTCTTCTTGCAATTGCTGCTGGAAATAGACGGCCGATTCTTCCTAACTTGGAATTTGAGTATCCTGATCCAGATATTCACGAAGATTTGTATCAACTCATAAAATATTCATGTGGAGAAGTTTGTACAACCGAACAATTGGATAAAGTCATGAGGATTTGGACAACATTTTTAGAACCCATGCTTGGTGTTCCTTCTCGACGGCGCGTTGCCGAAGACACAGAAGATGCTGTCAAGGCTAAGAATGATTCTGCAAAAACTGGCACTGCAAGTATTGCCAAGGGTGATAGTAGTCCTGGTGTTGGTGTCACCGTAATGAATCCTAAGAATTCAAACACTAATAGAAATGGGGATGCTAGTGTTCCATTTCAACAATCAAATTCTTGCAAAGAATGGCAAAGTAATGGGGTTAAAGGGGACGTGTGTCTTGAATCAGACCGTTCTGCACTCAAGAATGAAACTTTGGGAAGTAGTACACTGCAAGGTAAAATTCATATAAGTGCATCCATTCCTGATGAAGTATCAAGAGTCAATAAGCAAGATCATTCCATTGAACAGTTAGTGAATGCTAATGTATCACTGTCCTCTGGAATGGAGCAAAGTAATGGAAGAACAAACATTAATAATGCATCAGGACTTGCTGCAACTCTGTCTCGACCTGGTTATGTTTCTAGTGAGGGAGGGCTTGATTTACCTTCATCAGAGGGTGCTGATTCTACAAGACCAGATACATCCACAAATGGGGCCATCACCAAAGACACCAAAGTTCAAAGATGTCACAAAGAATCAGCTGGACACTTCAAAAGTGAAAGAGAAGAGGGTGAATTATCGCCTAATGGAGACTTTGAAGAGGATAACTTTGCAGTTTATGCAAATGCTGGTCTGGAGGCAGTGCATAAAGGAAAAGATTGTAATACCAGTCAACAATACCAAAATAGACATGGAAAACAAATTTGTGGTGAAGCTGGAGGTGTAAATGACGATGAAAGTGATAGAAGTCCTCATAGATCATCTGACGAGAGTGAAAATGCATCTGAGAATGGTGATGTTTCTGGTACAGAGTCTGCTGATGGTGAGGAATGTTCTCGAGAAGAACATGAAGAGGATGGGGATCACGAACATGATAACAAGCCCGAGAGTGAAGGTGAAGGTGAAGGAATGGCTGATGCCAATGATTTTGAAGGAGACGGAGCCTCATTGCCATATTCAGAGCGCTTTCTTCTCACTGTAAAGCCTCTGGTAAAACATGTTCGCCCAGTGTTGCATGGGAAAGAGAAGAATGTTCAAATTTTTTATGGAAACGATTCCTTTTATGTACTGTTTAGACTTCATCAGACATTGTATGAGAGGATACAATCCGCAAAAATTAACTCATCTTCTGCTGAAAGGAAATGGAGAGCTTCAAATGATACATGTTCTACTGATCAATATGGCAGGTTCATGAATTCTCTTTACAGTTTACTGGATGGTTCTTCTGATAACTCAAAATTTGAGGATGACTGTCGAGCTATTATTGGAACTCAGTCATATGTCTTGTTCACGTTAGACAAGCTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCCAGTGCCACTGATGAGATGGATAACAAACTTCTTCAACTATATGCATATGAGCAATCAAGAAAACCCGGAAGCTTTGCTGATATAGTTTATCATGAAAATGCCCGTGTTCTTCTTCATGATGAGAACATATATCGTATTGAGCGTTCCTCTACACCGACTCGACTGTCTATTCAGTTGATGGATTATGGACATGATAAGCCTGAAGTGACTGCTGTGGCAATAGATCCTAATTTTTCAACATATCTGCACAATGATTTCCTATCTGTTGTCCCTGACAGTAAGGAGAAGTCAGGAGTTTTCTTAAGAAGGAATAAGCTAAAATGTGGCTGGAGTGATGAATTTTCAAGCCAGGCCATAGATGAAGTACAAGTTATCAATGGTCTGGAGTGTAAGATTTCTTGCAATTCATCCAAGGTTTCATATGTTTTAGATACCGAGGACTCTTTATTTCGAGCAAAAAAGAAAAGGAGAACTTTGCAAACATATCGTGAACAGACAATGTCTTCAAACATTTGTTCAAGCAGATCACAGCGGTTCTGCAAATTATTTTCCATCAAGTGA 4272 0.4022 MLCLFVSLFLLQMKRSRDDVYMSSQLKRPVLSSRGEPSGQPQVMSGGQKLTTNDALSYLKAVREMFQDDKEKYDEFLEVMKDFKAQRIDTAGVIERVKELFKGHKDLILGFNTFLPKGYAITLPSENEPPPLKKPVEFEEAINFVGKIKTRFQGNDRVYKTFLDILNMYRKETKTITVVYQEVSALFQDHADLLEEFTHFLPDTSGAAAAHFASARNSLRDRNSAMATVRQTHVEKREKTIALHADRDLGVDHSDPELERGVMRVDKEQRRREREKDRREERDRRERDDRDYDNDGNRDRLSHKRKSGHRAIDAGTEPSHDADEKLDMHPISSASEDKSSLKSMCSPVLAFLEKVKEKLRNPEDYQEFLKCLHIYSREIITRSELLALVGDLLGKYADIMEGFDDFVTQCEKNEGFLAGVMNKKSLWNEGHGPKPVKVEDKDRDRDRDDGVKERDRELRERDKSTGIANKDVSIPKVSLSKDKYVGKPINELDLSNCEQCTPSYRLLPKNYPIPIASQRTELGDEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTNKKVEEILDKVNANIIQGDIPIRIEEHLTPLNLRCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLGEIKEISEKKRKEDDVLLAIAAGNRRPILPNLEFEYPDPDIHEDLYQLIKYSCGEVCTTEQLDKVMRIWTTFLEPMLGVPSRRRVAEDTEDAVKAKNDSAKTGTASIAKGDSSPGVGVTVMNPKNSNTNRNGDASVPFQQSNSCKEWQSNGVKGDVCLESDRSALKNETLGSSTLQGKIHISASIPDEVSRVNKQDHSIEQLVNANVSLSSGMEQSNGRTNINNASGLAATLSRPGYVSSEGGLDLPSSEGADSTRPDTSTNGAITKDTKVQRCHKESAGHFKSEREEGELSPNGDFEEDNFAVYANAGLEAVHKGKDCNTSQQYQNRHGKQICGEAGGVNDDESDRSPHRSSDESENASENGDVSGTESADGEECSREEHEEDGDHEHDNKPESEGEGEGMADANDFEGDGASLPYSERFLLTVKPLVKHVRPVLHGKEKNVQIFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWRASNDTCSTDQYGRFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVASATDEMDNKLLQLYAYEQSRKPGSFADIVYHENARVLLHDENIYRIERSSTPTRLSIQLMDYGHDKPEVTAVAIDPNFSTYLHNDFLSVVPDSKEKSGVFLRRNKLKCGWSDEFSSQAIDEVQVINGLECKISCNSSKVSYVLDTEDSLFRAKKKRRTLQTYREQTMSSNICSSRSQRFCKLFSIK* 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 785 809 - -
Tpr7g2081 1423 Gene3D Paired amphipathic helix 340 412 IPR036600 GO:0006355
Tpr7g2081 1423 SUPERFAMILY PAH2 domain 47 117 IPR036600 GO:0006355
Tpr7g2081 1423 Coils Coil 569 589 - -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 433 464 - -
Tpr7g2081 1423 Pfam Paired amphipathic helix repeat 363 406 IPR003822 GO:0006355
Tpr7g2081 1423 Pfam Paired amphipathic helix repeat 158 201 IPR003822 GO:0006355
Tpr7g2081 1423 Pfam Paired amphipathic helix repeat 71 115 IPR003822 GO:0006355
Tpr7g2081 1423 Gene3D Paired amphipathic helix 133 205 IPR036600 GO:0006355
Tpr7g2081 1423 Pfam Sin3 family co-repressor 498 588 IPR013194 -
Tpr7g2081 1423 SMART hdac_interact2seq4b 496 596 IPR013194 -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 1063 1091 - -
Tpr7g2081 1423 ProSiteProfiles PAH domain profile. 134 204 IPR003822 GO:0006355
Tpr7g2081 1423 PANTHER SIN3B-RELATED 13 1401 IPR039774 GO:0003714
Tpr7g2081 1423 SUPERFAMILY PAH2 domain 346 410 IPR036600 GO:0006355
Tpr7g2081 1423 Pfam C-terminal domain of Sin3a protein 1138 1386 IPR031693 -
Tpr7g2081 1423 Coils Coil 265 285 - -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 944 960 - -
Tpr7g2081 1423 ProSiteProfiles PAH domain profile. 341 410 IPR003822 GO:0006355
Tpr7g2081 1423 SUPERFAMILY PAH2 domain 130 203 IPR036600 GO:0006355
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 245 325 - -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 1022 1093 - -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 1032 1050 - -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 429 464 - -
Tpr7g2081 1423 ProSiteProfiles PAH domain profile. 48 118 IPR003822 GO:0006355
Tpr7g2081 1423 Gene3D Paired amphipathic helix 54 116 IPR036600 GO:0006355
Tpr7g2081 1423 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 13 1401 - -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 961 983 - -
Tpr7g2081 1423 MobiDBLite consensus disorder prediction 931 988 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2081 Tpr-Chr7 26213316 26226292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2081 40 130 WRKY Transcription Factor Family AT4G12020 55.319 2.63e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g2081 Sin3a_C 2.5e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2081 K11644 - gmx:100781798 2066.97