Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2080 ATGAATGGGTCCTCAAATCCAATAGCTGAAGGTGTACAACAATTGGTGAACAATATCCAAGCAAATATTGTGGACCATGGCAGAGAGAGTGATGTTAATTATATACCGCACTTAGAAATGGAATTTGAATCCGAGGTAGCAGCTTATGATTTTTATAACGAGTACAGCAAGAAAATGGGGTTCGGTATTCGCCGCGAATATGGGAATAAAAGCAAAATAGATGGAGTTCTAACTTCCAGAAGATTCACATGCTTCAAAGAGGGTAATCGAGGTGTTGACAAGCGAGATTACTTGACAAAAGATCCTAGAGCAGAAACAAGAACCGGATGTCAAGCACGCATGGTTATTTCGCTTGATCGGAAGATCGGAAAATACAAGGTTGTTGACTTTGTTGCTCAACACAATCACATGCTTCAACCAAATGAGTATGTCCATATGATTCGCTCTCATCGACGCATATTCGAGTCTCAAGCATCTCAAATTATATTGGCCGATGAATCTGGACTAAAACCAAAAGATTTCCATAATTATGTGTCCAAGCAAGCTGGTGGAAAAGAAATTATTGGATATACAAGACAAGACCTTAAGAATTACCTTCGAACCAAGAGAATGCATACACTAAAGTTTGGTGAAGTGGGTGCATTGTTGATGCATTTCAAACAGCAGAGTGAAAATCCTTCATTCTTTTATGAATTTCAAATGGATGTTGAAGAGCAAATAACAAATATATTTTGGGCAGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTGATCACTTTCGACACCACATATAAGACAAATAAGGATTATCGGCCACTTGGAGTATTTGTTGGCCTTAATAATCATAGGAAAACTGTTATTTTTGGGGCAGCATTGCTATATGATGAAACAACCCCTTCTTTTCAATGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGAAAAAAAGCCTAAAACCATTCTAACCGATCAAGATCCTGCAATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTATGCACTTGGCATATAAGGCAAAATGCTATGAAGCATGTAAATCATCTATATCAAAAGAGTTCTCAATTCAACAAGGCTTTTGAAGCATGCATCGATTTACATGAAGAGGAAAGCGAGTTTTTGAGTGCATGGGAAGATTTGCTTGCTGAGCATAAGGTTCCAACTGATTCTTGGCTGCATACAATTTTTCGAGTGAAGGAAAAATGGGCATGGGCTTATGTTCGGAAAACTTTCACTGCCGGTATGAGATCTACTCAATTAAGTGAAAGCTTTAATGCTGATTTAAAAAATCATTTGAAGTCAGATTTAAATTTAGTGCAATTTTTCACTCATTTTGAAAGGGCTGTCAATGAAAAAAGAAACAATGCGTCAGAGGCTGAGTTTGATTCAAGACATAAATTGCCTAGATTGAAAATGAAGAAGGCCCCTATGCTTGTACAAGCTGGAAATATTTATACATCAAAAATATTTGAAGAATTCCAAGAGGAATATGATGAATATCAAGGCACTTGCATAAAGGTTTTGGAAGAAGGAGTATACATTGTAACAAATTATGATAATGGTAAAGAGCGGAAAGTAACGGGGAGTCTTCTTGATCAAAAGGTTTCTTGTGATTGTCGTAAATTTGAGACACATGGTATCTTATGCAGTCATGCTTTAAAAGTTTTGGATATCATGAATATTAAGCTAATTCCTGAGCATTATATACTAAAACGATGGACAAGAGATGCAAGGTTGGGAAGTAACATGGATTTGAAAGGACAACACATAGATTTGGACATAAAAGCTCATTTCATGAAGCGGTACAATGAGTTATGTCCTCGAATGGTTAAGTTGATAAATAGAGCATCTGAAACTCATGAAACTTACACATTTATGTCCAAAGTTTATGAAGAGTCCGGAAAAATAGTTGAGAATATGTTGGCTAAGAAGTCCATGGATGCAGAATCAATTGGAATGCGTCATGTTTCTATATCAATTTCAACTGGAGAAATAGACAACAACGTGGACACTACTGATGTTGGTGGACCAAGAGGCATCAAGAAGAAAGATTGCTTATGTAAGTCAAAAAAGAGACCCAAATCTTGGGTTGAAAGACTGGCAAGAAAGAGAAAGGGAAACCAATCACAGAAAATGAGAAAGCCTGCAAATAAAATGCAACCATTGGCATTGGACTGCAGTTCAATCTCTCCATCTCAAGATCACCTCATTGGGAATGCAAGTCAACATGTGACTGCATATCAGCATGAGGCTGCAAGTCAACATGGGACTGCATATCAGCATGGAACTGCGTATCAGCTCGGGGCTGCGAGTCAACATGGGACTGCATATCAGCATGAGGCTGCTAGTCAACATGGAACTGCATATCAGCATGAGGCTGCAAGTCAACATGGAACTGCATATCAGCTTTTTTACATCTGA 2460 0.3772 MNGSSNPIAEGVQQLVNNIQANIVDHGRESDVNYIPHLEMEFESEVAAYDFYNEYSKKMGFGIRREYGNKSKIDGVLTSRRFTCFKEGNRGVDKRDYLTKDPRAETRTGCQARMVISLDRKIGKYKVVDFVAQHNHMLQPNEYVHMIRSHRRIFESQASQIILADESGLKPKDFHNYVSKQAGGKEIIGYTRQDLKNYLRTKRMHTLKFGEVGALLMHFKQQSENPSFFYEFQMDVEEQITNIFWADAQMINDYGYFGDVITFDTTYKTNKDYRPLGVFVGLNNHRKTVIFGAALLYDETTPSFQWLFETFLKAMGEKKPKTILTDQDPAMAKAISLVMPETFHGLCTWHIRQNAMKHVNHLYQKSSQFNKAFEACIDLHEEESEFLSAWEDLLAEHKVPTDSWLHTIFRVKEKWAWAYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLVQFFTHFERAVNEKRNNASEAEFDSRHKLPRLKMKKAPMLVQAGNIYTSKIFEEFQEEYDEYQGTCIKVLEEGVYIVTNYDNGKERKVTGSLLDQKVSCDCRKFETHGILCSHALKVLDIMNIKLIPEHYILKRWTRDARLGSNMDLKGQHIDLDIKAHFMKRYNELCPRMVKLINRASETHETYTFMSKVYEESGKIVENMLAKKSMDAESIGMRHVSISISTGEIDNNVDTTDVGGPRGIKKKDCLCKSKKRPKSWVERLARKRKGNQSQKMRKPANKMQPLALDCSSISPSQDHLIGNASQHVTAYQHEAASQHGTAYQHGTAYQLGAASQHGTAYQHEAASQHGTAYQHEAASQHGTAYQLFYI* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2080 819 SMART 26again6 548 575 IPR006564 GO:0008270
Tpr7g2080 819 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 668 IPR031052 GO:0006355
Tpr7g2080 819 Pfam SWIM zinc finger 547 569 IPR007527 GO:0008270
Tpr7g2080 819 ProSiteProfiles Zinc finger SWIM-type profile. 526 573 IPR007527 GO:0008270
Tpr7g2080 819 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 20 668 - -
Tpr7g2080 819 Pfam MULE transposase domain 260 354 IPR018289 -
Tpr7g2080 819 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2080 Tpr-Chr7 26173452 26176793 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr7g2080 MULE 2.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2080 - - cam:101500125 1165.6